RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 LYPLA1O75608 230 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-201ENST00000238688 UGT1A6P19224 532 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 UGT1A1P22309 533 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 UGT1A4P22310 534 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 SERPINB3P29508 390 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 UGT1A3P35503 534 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 UGT1A5P35504 534 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 PRLHRP49683 370 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 HNMTP50135 292 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 PKNOX1P55347 436 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 RPL6Q02878 288 aaKnown RBP12.95□□□□□ -0.34
SLIRP-201ENST00000238688 ACOX1Q15067 660 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 PCBP2Q15366 365 aaKnown RBP eCLIP12.95□□□□□ -0.34
SLIRP-201ENST00000238688 TGFBIQ15582 683 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 OR4D1Q15615 310 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 TSNQ15631 228 aaKnown RBP12.95□□□□□ -0.34
SLIRP-201ENST00000238688 CST6Q15828 149 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 BCL7AQ4VC05 210 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 SULT1C3Q6IMI6 304 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 KIAA1161Q6NSJ0 714 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 SBSNQ6UWP8 590 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 ADAMTSL4Q6UY14 1074 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 SLC36A4Q6YBV0 504 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 RNF165Q6ZSG1 346 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 USP30Q70CQ3 517 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 MTDHQ86UE4 582 aaKnown RBP12.95□□□□□ -0.34
SLIRP-201ENST00000238688 CPNE9Q8IYJ1 553 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 ZNF781Q8N8C0 355 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 PTGR2Q8N8N7 351 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-201ENST00000238688 ACTRT2Q8TDY3 377 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 EEF1AKMT1Q8WVE0 214 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 ASB12Q8WXK4 309 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 GLMNQ92990 594 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 MAELQ96JY0 434 aaKnown RBP12.95□□□□□ -0.34
SLIRP-201ENST00000238688 RILPQ96NA2 401 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 RIOK2Q9BVS4 552 aaKnown RBP12.95□□□□□ -0.34
SLIRP-201ENST00000238688 ABCG8Q9H221 673 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 GSTO2Q9H4Y5 243 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 COG4Q9H9E3 785 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 CAPN10Q9HC96 672 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 TCF7L2Q9NQB0 619 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 FSCN3Q9NQT6 498 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 ITM2CQ9NQX7 267 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 USP36Q9P275 1121 aaKnown RBP12.95□□□□□ -0.34
SLIRP-201ENST00000238688 SARDHQ9UL12 918 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 GPR34Q9UPC5 381 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 CDYLQ9Y232 598 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 FADS3Q9Y5Q0 445 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 TP53BP1Q12888 1972 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-201ENST00000238688 TMEM131Q92545 1883 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 C17orf113A0A1B0GUU1 675 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 FCHO1O14526 889 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 LIN7AO14910 233 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-201ENST00000238688 SUPT7LO94864 414 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 SLCO2B1O94956 709 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 C6P13671 934 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 HLA-EP13747 358 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 ARRB2P32121 409 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 ETV3P41162 512 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 IDH3AP50213 366 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 PTPRRQ15256 657 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 PFKFB4Q16877 469 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 TTC31Q49AM3 519 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-201ENST00000238688 PIP5KL1Q5T9C9 394 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 CUZD1Q86UP6 607 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 TMPRSS6Q8IU80 811 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 MMAAQ8IVH4 418 aaKnown RBP12.94□□□□□ -0.34
SLIRP-201ENST00000238688 CLYBLQ8N0X4 340 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 LSMEM2Q8N112 164 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 SPATA6LQ8N4H0 392 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 OR56A4Q8NGH8 313 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 LINC00615Q96LM1 132 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-201ENST00000238688 RAB3IPQ96QF0 476 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-201ENST00000238688 ZNF382Q96SR6 550 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 BOCQ9BWV1 1114 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 LRMDAQ9H2I8 198 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 RASSF4Q9H2L5 321 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 MEAF6Q9HAF1 191 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 TMEM9BQ9NQ34 198 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 TMEM45AQ9NWC5 275 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 WSB2Q9NYS7 404 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-201ENST00000238688 FZD4Q9ULV1 537 aa12.94□□□□□ -0.34
SLIRP-201ENST00000238688 DNMT3AQ9Y6K1 912 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-201ENST00000238688 CEP295Q9C0D2 2601 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 USP24Q9UPU5 2620 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 NPEPPSL1A6NEC2 478 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 UBXN8O00124 270 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 FFAR2O15552 330 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 SPINT1O43278 529 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 LZTS3O60299 673 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-201ENST00000238688 RECQL5O94762 991 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-201ENST00000238688 TRIM16O95361 564 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 CHEK2O96017 543 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 IGLV3-19P01714 112 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 EZRP15311 586 aaKnown RBP12.93□□□□□ -0.34
SLIRP-201ENST00000238688 ENGP17813 658 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 HOXD12P35452 270 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 GMPRP36959 345 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 PSMD8P48556 350 aa12.93□□□□□ -0.34
SLIRP-201ENST00000238688 B4GALNT1Q00973 533 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms