RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 SP140LQ9H930 580 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 POLR3BQ9NW08 1133 aaPredicted RBP11.38□□□□□ -0.59
LAMA4-201ENST00000230538 KLF15Q9UIH9 416 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 SLC38A8A6NNN8 435 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 PSMD9O00233 223 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 B3GALT2O43825 422 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 GADD45GO95257 159 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 PTGER3P43115 390 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 TEAD4Q15561 434 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 ATAT1Q5SQI0 421 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 NPAS4Q8IUM7 802 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 FBXO15Q8NCQ5 510 aaPredicted RBP11.38□□□□□ -0.59
LAMA4-201ENST00000230538 BRSK1Q8TDC3 778 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 PMM1Q92871 262 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 NODALQ96S42 347 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 MGME1Q9BQP7 344 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 SSU72Q9NP77 194 aaKnown RBP11.38□□□□□ -0.59
LAMA4-201ENST00000230538 LGALS13Q9UHV8 139 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 MGAT4AQ9UM21 535 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 IRF9Q00978 393 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 IFI44LQ53G44 452 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 USP30Q70CQ3 517 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 TNFAIP8L1Q8WVP5 186 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 SRMSQ9H3Y6 488 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 FAM124BQ9H5Z6 455 aaPredicted RBP11.38□□□□□ -0.59
LAMA4-201ENST00000230538 CDH7Q9ULB5 785 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 PDPK1O15530 556 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 PEX10O60683 326 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 PTX3P26022 381 aaPredicted RBP11.38□□□□□ -0.59
LAMA4-201ENST00000230538 PEX2P28328 305 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 GRK6P43250 576 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 AVPR1BP47901 424 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 AKR1D1P51857 326 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 CARTPTQ16568 116 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 ZDHHC21Q8IVQ6 265 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 LPIN3Q9BQK8 851 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 DENND2DQ9H6A0 471 aaPredicted RBP11.38□□□□□ -0.59
LAMA4-201ENST00000230538 TBC1D17Q9HA65 648 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 HEBP2Q9Y5Z4 205 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 CPQQ9Y646 472 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 SCAMP1O15126 338 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 SHOX2O60902 331 aaPredicted RBP11.38□□□□□ -0.59
LAMA4-201ENST00000230538 GATBO75879 557 aaKnown RBP11.38□□□□□ -0.59
LAMA4-201ENST00000230538 ESR1P03372 595 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 PTPN2P17706 415 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 SLC13A2Q13183 592 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 PRKD1Q15139 912 aaPredicted RBP11.38□□□□□ -0.59
LAMA4-201ENST00000230538 OR10H4Q8NGA5 316 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 MARCH7Q9H992 704 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 INTS10Q9NVR2 710 aaKnown RBP11.38□□□□□ -0.59
LAMA4-201ENST00000230538 C1orf109Q9NX04 203 aa11.38□□□□□ -0.59
LAMA4-201ENST00000230538 BTBD19C9JJ37 291 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 EFNA1P20827 205 aaPredicted RBP11.37□□□□□ -0.59
LAMA4-201ENST00000230538 PDX1P52945 283 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 SCN1BQ07699 218 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 OTOP2Q7RTS6 562 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 COX18Q8N8Q8 333 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 UPB1Q9UBR1 384 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 RBMX2Q9Y388 322 aaKnown RBP11.37□□□□□ -0.59
LAMA4-201ENST00000230538 UGT1A9O60656 530 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 TSPAN9O75954 239 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 UBXN7O94888 489 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 ZNF823P16415 610 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 CEBPGP53567 150 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 AQP4P55087 323 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 TLR1Q15399 786 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 VARS2Q5ST30 1063 aaKnown RBP11.37□□□□□ -0.59
LAMA4-201ENST00000230538 VITQ6UXI7 678 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 FAM156AQ8NDB6 213 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 HERVK_113Q902F9 699 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 PIK3R3Q92569 461 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 UFD1Q92890 307 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 SLC38A3Q99624 504 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 UGT1A7Q9HAW7 530 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 UGT1A10Q9HAW8 530 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 UGT1A8Q9HAW9 530 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 NDRG2Q9UN36 371 aaKnown RBP11.37□□□□□ -0.59
LAMA4-201ENST00000230538 ARL5AQ9Y689 179 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 ANXA2P2A6NMY6 339 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 ANXA2P07355 339 aaKnown RBP11.37□□□□□ -0.59
LAMA4-201ENST00000230538 EIPR1Q53HC9 387 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 PITRM1Q5JRX3 1037 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 PIWIL1Q96J94 861 aaKnown RBP11.37□□□□□ -0.59
LAMA4-201ENST00000230538 SPATA9Q9BWV2 254 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 NUSAP1Q9BXS6 441 aaKnown RBP11.37□□□□□ -0.59
LAMA4-201ENST00000230538 CNTN6Q9UQ52 1028 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 PDE10AQ9Y233 779 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 C2CD4BA6NLJ0 364 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 TEX46H3BTG2 121 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 DNM1LO00429 736 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 ZNF208O43345 1280 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 NSG1P42857 185 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 PGDP52209 483 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 CYP2U1Q7Z449 544 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 FSTL5Q8N475 847 aaPredicted RBP11.37□□□□□ -0.59
LAMA4-201ENST00000230538 OR2L3Q8NG85 312 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 SMURF2Q9HAU4 748 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 MRPS30Q9NP92 439 aaKnown RBP11.37□□□□□ -0.59
LAMA4-201ENST00000230538 ZDHHC4Q9NPG8 344 aa11.37□□□□□ -0.59
LAMA4-201ENST00000230538 EIF2B3Q9NR50 452 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms