RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 PADI3Q9ULW8 664 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 RNF112Q9ULX5 631 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 NLRC5Q86WI3 1866 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 KCNK1O00180 336 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 SLC10A3P09131 477 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 CD52P31358 61 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 HTR7P34969 479 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 GABARAPL2P60520 117 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 TEKQ02763 1124 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 INPP5AQ14642 412 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 UGP2Q16851 508 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 ZNF404Q494X3 552 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 XKRXQ6PP77 449 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 HDDC2Q7Z4H3 204 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 THAP5Q7Z6K1 395 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 EDEM1Q92611 657 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 TBATAQ96M53 351 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 SAMD11Q96NU1 681 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 SLC39A1Q9NY26 324 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 GABRQQ9UN88 632 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 PDE10AQ9Y233 779 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 OR6C70A6NIJ9 312 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 GPR182O15218 404 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 PPM1BO75688 479 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 POMCP01189 267 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 PRKCGP05129 697 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 ITGA2P17301 1181 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 PSMA4P25789 261 aaKnown RBP13.4□□□□□ -0.26
GABPB1-201ENST00000220429 PCSK1P29120 753 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 TPI1P60174 286 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 OLIG2Q13516 323 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 EFR3AQ14156 821 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 BCL7AQ4VC05 210 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 ALFQ53S48 1182 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 BSPRYQ5W0U4 402 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 RAP1GAP2Q684P5 730 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 SEL1L3Q68CR1 1132 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 CD300LGQ6UXG3 332 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 NPWQ8N729 165 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 ZHX1-C8orf76Q96EF9 292 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 SP110Q9HB58 689 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 CSNK1G1Q9HCP0 422 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 DPP7Q9UHL4 492 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 SNX10Q9Y5X0 201 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 COPG1Q9Y678 874 aaKnown RBP13.4□□□□□ -0.26
GABPB1-201ENST00000220429 STON1Q9Y6Q2 735 aa13.4□□□□□ -0.26
GABPB1-201ENST00000220429 COL4A4P53420 1690 aaPredicted RBP13.4□□□□□ -0.26
GABPB1-201ENST00000220429 MEIOCA2RUB1 952 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 H0Y626 953 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 ACADMP11310 421 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 PCSK2P16519 638 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 MSH3P20585 1137 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 PTPN3P26045 913 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 THPOP40225 353 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 BRCC3P46736 316 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 SLAMF1Q13291 335 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 ZIK1Q3SY52 487 aaPredicted RBP13.4□□□□□ -0.27
GABPB1-201ENST00000220429 RBM20Q5T481 1227 aaKnown RBP13.4□□□□□ -0.27
GABPB1-201ENST00000220429 GK5Q6ZS86 529 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 PID1Q7Z2X4 250 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 EFL1Q7Z2Z2 1120 aaKnown RBP13.4□□□□□ -0.27
GABPB1-201ENST00000220429 KIF18BQ86Y91 864 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 LIX1LQ8IVB5 337 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 KIAA1958Q8N8K9 716 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 RAET1EQ8TD07 263 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 SEC22CQ9BRL7 303 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 COLEC11Q9BWP8 271 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 BEX2Q9BXY8 128 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 NUAK2Q9H093 628 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 EVA1BQ9NVM1 165 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 EHD3Q9NZN3 535 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 SARDHQ9UL12 918 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 PNMA8BQ9ULN7 279 aaPredicted RBP13.4□□□□□ -0.27
GABPB1-201ENST00000220429 AUP1Q9Y679 476 aa13.4□□□□□ -0.27
GABPB1-201ENST00000220429 AKR7A2O43488 359 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 ZNF623O75123 536 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 ADAMTS4O75173 837 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 ZNF30P17039 623 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 CNTFP26441 200 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 CD83Q01151 205 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 IFRD2Q12894 506 aaPredicted RBP13.39□□□□□ -0.27
GABPB1-201ENST00000220429 NAPRTQ6XQN6 538 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 NRARPQ7Z6K4 114 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 HASPINQ8TF76 798 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 RPRD1AQ96P16 312 aaPredicted RBP13.39□□□□□ -0.27
GABPB1-201ENST00000220429 NODALQ96S42 347 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 PRRG3Q9BZD7 231 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 PITHD1Q9GZP4 211 aaPredicted RBP13.39□□□□□ -0.27
GABPB1-201ENST00000220429 CCDC90BQ9GZT6 254 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 C6orf62Q9GZU0 229 aaPredicted RBP13.39□□□□□ -0.27
GABPB1-201ENST00000220429 ILKAPQ9H0C8 392 aaPredicted RBP13.39□□□□□ -0.27
GABPB1-201ENST00000220429 IFT46Q9NQC8 304 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 ENTPD7Q9NQZ7 604 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 TLR9Q9NR96 1032 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 INTS7Q9NVH2 962 aaKnown RBP13.39□□□□□ -0.27
GABPB1-201ENST00000220429 TMLHEQ9NVH6 421 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 ZNF224Q9NZL3 707 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 TMEM181Q9P2C4 612 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 SNX6Q9UNH7 406 aa13.39□□□□□ -0.27
GABPB1-201ENST00000220429 PATJQ8NI35 1801 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms