RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 PLK4O00444 970 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 ANGPT2O15123 496 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 SYNCRIPO60506 623 aaKnown RBP9.79□□□□□ -0.84
USP11-201ENST00000218348 FKBP6O75344 327 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 TYRP14679 529 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 NCK1P16333 377 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 ITGALP20701 1170 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 SERPINA4P29622 427 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 MLLT3P42568 568 aaPredicted RBP9.79□□□□□ -0.84
USP11-201ENST00000218348 MESP2Q0VG99 397 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 GRIN2CQ14957 1233 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 INO80DQ53TQ3 878 aaPredicted RBP9.79□□□□□ -0.84
USP11-201ENST00000218348 RABL3Q5HYI8 236 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 CRTC1Q6UUV9 634 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 SERPINA13PQ6UXR4 307 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 TMC5Q6UXY8 1006 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 NKAPQ8N5F7 415 aaKnown RBP9.79□□□□□ -0.84
USP11-201ENST00000218348 CPSF7Q8N684 471 aaKnown RBP9.79□□□□□ -0.84
USP11-201ENST00000218348 MRPL38Q96DV4 380 aaKnown RBP9.79□□□□□ -0.84
USP11-201ENST00000218348 PKP2Q99959 881 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 SNX13Q9Y5W8 968 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 SPEGQ15772 3267 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 TTC34A8MYJ7 566 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 SEC24DO94855 1032 aaPredicted RBP9.79□□□□□ -0.84
USP11-201ENST00000218348 ZNF7P17097 686 aaPredicted RBP9.79□□□□□ -0.84
USP11-201ENST00000218348 LHCGRP22888 699 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 PBLDP30039 288 aaPredicted RBP9.79□□□□□ -0.84
USP11-201ENST00000218348 VIPR2P41587 438 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 CLCN7P51798 805 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 HK2P52789 917 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 DGKQP52824 942 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 EIF2B5Q13144 721 aaKnown RBP9.79□□□□□ -0.84
USP11-201ENST00000218348 STX5Q13190 355 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 COL9A2Q14055 689 aaPredicted RBP9.79□□□□□ -0.84
USP11-201ENST00000218348 GK3PQ14409 553 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 NR6A1Q15406 480 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 DUSP6Q16828 381 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 PDE12Q6L8Q7 609 aaKnown RBP9.79□□□□□ -0.84
USP11-201ENST00000218348 SLC22A15Q8IZD6 547 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 LILRA2Q8N149 483 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 FAR2Q96K12 515 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 ZNF576Q9H609 170 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 WWOXQ9NZC7 414 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 DNMT3BQ9UBC3 853 aaKnown RBP9.79□□□□□ -0.84
USP11-201ENST00000218348 PCTPQ9UKL6 214 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 PCDHGA8Q9Y5G5 932 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 MTCH2Q9Y6C9 303 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 A6NL46 340 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 SYCE1LA8MT33 242 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 GAPDHSO14556 408 aaPredicted RBP9.79□□□□□ -0.84
USP11-201ENST00000218348 FZD6O60353 706 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 MTRF1O75570 445 aaKnown RBP9.79□□□□□ -0.84
USP11-201ENST00000218348 RHOP08100 348 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 LBPP18428 481 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 GRIA3P42263 894 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 PTGER3P43115 390 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 METAP1P53582 386 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 TNK2Q07912 1038 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 GPM6BQ13491 265 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 CPSF6Q16630 551 aaKnown RBP eCLIP9.79□□□□□ -0.84
USP11-201ENST00000218348 GPRIN3Q6ZVF9 776 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 MILR1Q7Z6M3 343 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 RALGPS2Q86X27 583 aaPredicted RBP9.79□□□□□ -0.84
USP11-201ENST00000218348 APLFQ8IW19 511 aaPredicted RBP9.79□□□□□ -0.84
USP11-201ENST00000218348 PLPP6Q8IY26 295 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 ALDH16A1Q8IZ83 802 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 MIER2Q8N344 545 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 RNF175Q8N4F7 328 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 IER2Q9BTL4 223 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 IPPKQ9H8X2 491 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 SELENONQ9NZV5 590 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 B4GALT6Q9UBX8 382 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 KLQ9UEF7 1012 aa9.79□□□□□ -0.84
USP11-201ENST00000218348 INPP4BO15327 924 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 FFAR2O15552 330 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 RNASEH1O60930 286 aaKnown RBP9.78□□□□□ -0.84
USP11-201ENST00000218348 S100BP04271 92 aaPredicted RBP9.78□□□□□ -0.84
USP11-201ENST00000218348 MTHFD1P11586 935 aaKnown RBP9.78□□□□□ -0.84
USP11-201ENST00000218348 PRDX6P30041 224 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 E2F2Q14209 437 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 MYLK3Q32MK0 819 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 TCEAL5Q5H9L2 206 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 Q6ZVL8 140 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 RFPL4BQ6ZWI9 263 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 KBTBD6Q86V97 674 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 OR4F6Q8NGB9 312 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 CDC26Q8NHZ8 85 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 LRTOMTQ8WZ04 291 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 GUCD1Q96NT3 240 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 TCF12Q99081 682 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 KLHL4Q9C0H6 718 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 RSPH9Q9H1X1 276 aaPredicted RBP9.78□□□□□ -0.84
USP11-201ENST00000218348 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.78□□□□□ -0.84
USP11-201ENST00000218348 ELOVL2Q9NXB9 296 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 LRCH1Q9Y2L9 728 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 CCDC160A6NGH7 325 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 SERPINB7O75635 380 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 TIPRLO75663 272 aa9.78□□□□□ -0.84
USP11-201ENST00000218348 RNASEH2AO75792 299 aaKnown RBP9.78□□□□□ -0.84
USP11-201ENST00000218348 OR6B1O95007 311 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms