RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 GCNT7Q6ZNI0 430 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 SLC26A9Q7LBE3 791 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 RASAL3Q86YV0 1011 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 HERVK_113Q902F9 699 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 NDRG1Q92597 394 aaKnown RBP14.42□□□□□ -0.1
PTPRA-201ENST00000216877 MAGEB10Q96LZ2 347 aaPredicted RBP14.42□□□□□ -0.1
PTPRA-201ENST00000216877 C1QTNF1Q9BXJ1 281 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 FAM105AQ9NUU6 356 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 RDH8Q9NYR8 311 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 LEF1Q9UJU2 399 aaPredicted RBP14.42□□□□□ -0.1
PTPRA-201ENST00000216877 OAS3Q9Y6K5 1087 aaKnown RBP14.42□□□□□ -0.1
PTPRA-201ENST00000216877 TEX51A0A1B0GUA7 166 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 CCL22O00626 93 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 AZIN1O14977 448 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 CAPN5O15484 640 aaPredicted RBP14.42□□□□□ -0.1
PTPRA-201ENST00000216877 PROS1P07225 676 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 DNAJB1P25685 340 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 SCN1BQ07699 218 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 GRM7Q14831 915 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 PSMD5Q16401 504 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 PRSS36Q5K4E3 855 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 ZNF767PQ75MW2 155 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 SYVN1Q86TM6 617 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 GLCCI1Q86VQ1 547 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 COMMD7Q86VX2 200 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 OR10T2Q8NGX3 314 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 ESAMQ96AP7 390 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 NSUN5Q96P11 429 aaKnown RBP14.42□□□□□ -0.1
PTPRA-201ENST00000216877 FAM129BQ96TA1 746 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 TRIM54Q9BYV2 358 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 ABCB8Q9NUT2 735 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 RNF181Q9P0P0 153 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 REV1Q9UBZ9 1251 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 DNAJC15Q9Y5T4 150 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 TCRBV5S2A0A599 114 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 E9PAM4 449 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 PSIP1O75475 530 aaKnown RBP14.42□□□□□ -0.1
PTPRA-201ENST00000216877 ENDOD1O94919 500 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 CPB1P15086 417 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 HMGCS2P54868 508 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 HSPA14Q0VDF9 509 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 DGKZQ13574 1117 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 GPR158Q5T848 1215 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 CACHD1Q5VU97 1274 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 LINC00299Q6ZSB3 139 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 ACOT1Q86TX2 421 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 RIOX2Q8IUF8 465 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 TMEM151AQ8N4L1 468 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 OR2T12Q8NG77 320 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 POF1BQ8WVV4 589 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 COQ8BQ96D53 544 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 NSMCE4AQ9NXX6 385 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 MAGEL2Q9UJ55 1249 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 PCDHA9Q9Y5H5 950 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 UBFD1O14562 309 aaKnown RBP14.41□□□□□ -0.1
PTPRA-201ENST00000216877 LZTS3O60299 673 aaPredicted RBP14.41□□□□□ -0.1
PTPRA-201ENST00000216877 PLOD3O60568 738 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 SLC22A3O75751 556 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 ADORA3P0DMS8 318 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 NDST1P52848 882 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 GHRHRQ02643 423 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 GPR50Q13585 617 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 FGFBP1Q14512 234 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 PARP15Q460N3 678 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 CELF3Q5SZQ8 465 aaKnown RBP14.41□□□□□ -0.1
PTPRA-201ENST00000216877 LAIR2Q6ISS4 152 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 CCDC149Q6ZUS6 474 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 CYP4Z1Q86W10 505 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 TTC29Q8NA56 475 aaPredicted RBP14.41□□□□□ -0.1
PTPRA-201ENST00000216877 LSM14AQ8ND56 463 aaKnown RBP14.41□□□□□ -0.1
PTPRA-201ENST00000216877 CELF6Q96J87 481 aaKnown RBP14.41□□□□□ -0.1
PTPRA-201ENST00000216877 LHX5Q9H2C1 402 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 SLC2A6Q9UGQ3 507 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 ZNF222Q9UK12 451 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 CRYL1Q9Y2S2 319 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 FER1L6Q2WGJ9 1857 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 KIAA0513O60268 411 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 SLC10A3P09131 477 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 TSPAN19P0C672 248 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 POU1F1P28069 291 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 GMPSP49915 693 aaPredicted RBP14.41□□□□□ -0.1
PTPRA-201ENST00000216877 JAG1P78504 1218 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 SYT6Q5T7P8 510 aaPredicted RBP14.41□□□□□ -0.1
PTPRA-201ENST00000216877 SYPL2Q5VXT5 272 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 GPR153Q6NV75 609 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 CDAN1Q8IWY9 1227 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 ZFAND1Q8TCF1 268 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 UTP15Q8TED0 518 aaKnown RBP14.41□□□□□ -0.1
PTPRA-201ENST00000216877 ACOX2Q99424 681 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 SLC22A4Q9H015 551 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 CPNE7Q9UBL6 633 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 A0A1W2PP18 115 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 H3BQ06 376 aaPredicted RBP14.41□□□□□ -0.1
PTPRA-201ENST00000216877 ITGB1P05556 798 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 ASPAP45381 313 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 BRCC3P46736 316 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 POLR2JP52435 117 aaKnown RBP14.41□□□□□ -0.1
PTPRA-201ENST00000216877 BAK1Q16611 211 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 AMHR2Q16671 573 aa14.41□□□□□ -0.1
PTPRA-201ENST00000216877 ZNF691Q5VV52 312 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms