RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 CDYLQ9Y232 598 aa19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 ASF1AQ9Y294 204 aa19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 GOLGA4Q13439 2230 aaKnown RBP19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 TRBV23OR9-2A0A075B6M9 112 aa19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 TNFSF14O43557 240 aa19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 CSRP1P21291 193 aaKnown RBP19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 MAZP56270 477 aaKnown RBP19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 GBX1Q14549 363 aa19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 TTC23LQ6PF05 361 aa19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 ADGRD1Q6QNK2 874 aa19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 PAQR3Q6TCH7 311 aa19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 UNC5DQ6UXZ4 953 aa19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 PIP4P1Q86T03 277 aa19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 C17orf82Q86X59 251 aaPredicted RBP19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 SPDYE1Q8NFV5 336 aaPredicted RBP19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 DCAKDQ8WVC6 231 aa19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 INSM2Q96T92 566 aaPredicted RBP19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 DHRS4Q9BTZ2 278 aa19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 TRIT1Q9H3H1 467 aaKnown RBP19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 MVB12BQ9H7P6 319 aa19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 SCHIP1Q9P0W5 487 aaPredicted RBP19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 GALPQ9UBC7 116 aa19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 ARID1BQ8NFD5 2236 aaPredicted RBP19.72■□□□□ 0.75
RHBDD3-201ENST00000216085 SNRPAP09012 282 aaKnown RBP19.71■□□□□ 0.75
RHBDD3-201ENST00000216085 MPC1LP0DKB6 136 aa19.71■□□□□ 0.75
RHBDD3-201ENST00000216085 ZNF37AP17032 561 aaPredicted RBP19.71■□□□□ 0.75
RHBDD3-201ENST00000216085 BMPR2Q13873 1038 aa19.71■□□□□ 0.75
RHBDD3-201ENST00000216085 TAF1BQ53T94 588 aaPredicted RBP19.71■□□□□ 0.75
RHBDD3-201ENST00000216085 ACSBG2Q5FVE4 666 aa19.71■□□□□ 0.75
RHBDD3-201ENST00000216085 XKR5Q6UX68 686 aa19.71■□□□□ 0.75
RHBDD3-201ENST00000216085 VRK3Q8IV63 474 aa19.71■□□□□ 0.75
RHBDD3-201ENST00000216085 BAHD1Q8TBE0 780 aaPredicted RBP19.71■□□□□ 0.75
RHBDD3-201ENST00000216085 MAGEC3Q8TD91 643 aa19.71■□□□□ 0.75
RHBDD3-201ENST00000216085 ZFPM2Q8WW38 1151 aa19.71■□□□□ 0.75
RHBDD3-201ENST00000216085 LINGO1Q96FE5 620 aa19.71■□□□□ 0.75
RHBDD3-201ENST00000216085 SLC30A3Q99726 388 aa19.71■□□□□ 0.75
RHBDD3-201ENST00000216085 CAB39LQ9H9S4 337 aa19.71■□□□□ 0.75
RHBDD3-201ENST00000216085 TLK1Q9UKI8 766 aa19.71■□□□□ 0.75
RHBDD3-201ENST00000216085 CFAP20Q9Y6A4 193 aaKnown RBP19.71■□□□□ 0.75
RHBDD3-201ENST00000216085 CPED1A4D0V7 1026 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 PABPN1LA6NDY0 278 aaKnown RBP19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 CBFA2T3O75081 653 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 CDH16O75309 829 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 TCEA3O75764 348 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 SHBGP04278 402 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 CCNFP41002 786 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 SLC19A1P41440 591 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 UBE2IP63279 158 aaKnown RBP19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 TDRPQ86YL5 185 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 RIBC1Q8N443 379 aaPredicted RBP19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 CFAP61Q8NHU2 1237 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 CAMK1GQ96NX5 476 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 FERD3LQ96RJ6 166 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 SLC38A3Q99624 504 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 RTKNQ9BST9 563 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 ROPN1BQ9BZX4 212 aaPredicted RBP19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 ROPN1Q9HAT0 212 aaPredicted RBP19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 ZNF624Q9P2J8 865 aaPredicted RBP19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 LRIT1Q9P2V4 623 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 CEP250Q9BV73 2442 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 EME2A4GXA9 379 aaPredicted RBP19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 PNLIPP16233 465 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 ACADLP28330 430 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 TYK2P29597 1187 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 TIAL1Q01085 375 aaKnown RBP eCLIP19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 ABRQ12979 859 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 DNAJC3Q13217 504 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 TRIP6Q15654 476 aaKnown RBP19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 ZKSCAN8Q15776 578 aaPredicted RBP19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 TBC1D1Q86TI0 1168 aaPredicted RBP19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 TBC1D21Q8IYX1 336 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 ACVR1CQ8NER5 493 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 DEFB124Q8NES8 71 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 POLG2Q9UHN1 485 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 TSR3Q9UJK0 312 aaKnown RBP19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 PLAAQ9Y263 795 aa19.7■□□□□ 0.74
RHBDD3-201ENST00000216085 SMIM23A6NLE4 172 aa19.69■□□□□ 0.74
RHBDD3-201ENST00000216085 RASGRF2O14827 1237 aa19.69■□□□□ 0.74
RHBDD3-201ENST00000216085 CATP04040 527 aaKnown RBP19.69■□□□□ 0.74
RHBDD3-201ENST00000216085 ACP1P24666 158 aa19.69■□□□□ 0.74
RHBDD3-201ENST00000216085 PLCL1Q15111 1095 aa19.69■□□□□ 0.74
RHBDD3-201ENST00000216085 RASA2Q15283 850 aa19.69■□□□□ 0.74
RHBDD3-201ENST00000216085 RSPO4Q2I0M5 234 aaPredicted RBP19.69■□□□□ 0.74
RHBDD3-201ENST00000216085 EFL1Q7Z2Z2 1120 aaKnown RBP19.69■□□□□ 0.74
RHBDD3-201ENST00000216085 CROCCP2Q86T23 111 aa19.69■□□□□ 0.74
RHBDD3-201ENST00000216085 CEP97Q8IW35 865 aa19.69■□□□□ 0.74
RHBDD3-201ENST00000216085 DCUN1D3Q8IWE4 304 aa19.69■□□□□ 0.74
RHBDD3-201ENST00000216085 SFTPA2Q8IWL1 248 aa19.69■□□□□ 0.74
RHBDD3-201ENST00000216085 OR5K2Q8NHB8 316 aa19.69■□□□□ 0.74
RHBDD3-201ENST00000216085 UCK1Q9HA47 277 aa19.69■□□□□ 0.74
RHBDD3-201ENST00000216085 SLC40A1Q9NP59 571 aa19.69■□□□□ 0.74
RHBDD3-201ENST00000216085 SNX15Q9NRS6 342 aa19.69■□□□□ 0.74
RHBDD3-201ENST00000216085 RNF215Q9Y6U7 377 aa19.69■□□□□ 0.74
RHBDD3-201ENST00000216085 A0A087X1B8 175 aa19.68■□□□□ 0.74
RHBDD3-201ENST00000216085 TRIM49D1C9J1S8 452 aa19.68■□□□□ 0.74
RHBDD3-201ENST00000216085 PHGDHO43175 533 aaKnown RBP19.68■□□□□ 0.74
RHBDD3-201ENST00000216085 GP1BAP07359 652 aa19.68■□□□□ 0.74
RHBDD3-201ENST00000216085 MAP4P27816 1152 aaKnown RBP19.68■□□□□ 0.74
RHBDD3-201ENST00000216085 GPR3P46089 330 aa19.68■□□□□ 0.74
RHBDD3-201ENST00000216085 PPM1FP49593 454 aaPredicted RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms