RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 CXorf57Q6NSI4 855 aaKnown RBP13.35□□□□□ -0.27
SF3A1-201ENST00000215793 FRRS1Q6ZNA5 592 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 ZNF554Q86TJ5 538 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 CMASQ8NFW8 434 aaPredicted RBP13.35□□□□□ -0.27
SF3A1-201ENST00000215793 SLCO2A1Q92959 643 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 LRRC3Q9BY71 257 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 FBXW2Q9UKT8 454 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 TESMINQ9Y4I5 508 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 TRBV23OR9-2A0A075B6M9 112 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 FOXO6A8MYZ6 492 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 ZNF879B4DU55 563 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 TMEM63AO94886 807 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 ALAS2P22557 587 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 ZFP69Q49AA0 526 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 RNF220Q5VTB9 566 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 EGFLAMQ63HQ2 1017 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 POMZP3Q6PJE2 187 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 OR4C6Q8NH72 309 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 WFIKKN2Q8TEU8 576 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 HTRA1Q92743 480 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 HPS1Q92902 700 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 DUSP26Q9BV47 211 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 KAT8Q9H7Z6 458 aaKnown RBP13.35□□□□□ -0.27
SF3A1-201ENST00000215793 PRDM4Q9UKN5 801 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 SNX10Q9Y5X0 201 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 HEBP2Q9Y5Z4 205 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 AQP12BA6NM10 295 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 GADD45GO95257 159 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 CYP4F8P98187 520 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 PUDPQ08623 228 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 ZCCHC12Q6PEW1 402 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 DNAJB7Q7Z6W7 309 aaPredicted RBP13.35□□□□□ -0.27
SF3A1-201ENST00000215793 AQP12AQ8IXF9 295 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 SLC35G5Q96KT7 338 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 ART5Q96L15 291 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 EBPLQ9BY08 206 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 GSDMCQ9BYG8 508 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 CDH7Q9ULB5 785 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 A0A1W2PRG6 482 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 EME2A4GXA9 379 aaPredicted RBP13.35□□□□□ -0.27
SF3A1-201ENST00000215793 RYKP34925 604 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 HERC3Q15034 1050 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 NAT14Q8WUY8 206 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 CLCC1Q96S66 551 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 ELOVL2Q9NXB9 296 aa13.35□□□□□ -0.27
SF3A1-201ENST00000215793 THUMPD1Q9NXG2 353 aaKnown RBP13.35□□□□□ -0.27
SF3A1-201ENST00000215793 CLDN25C9JDP6 229 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 PDPK1O15530 556 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 UBXN7O94888 489 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 C8AP07357 584 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 ANXA8P13928 327 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 IMPDH1P20839 514 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 CBX3Q13185 183 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 ADGRE1Q14246 886 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 ZNF460Q14592 562 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 CA9Q16790 459 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 RALGPS1Q5JS13 557 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 LCN1P1Q5VSP4 162 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 TPGS2Q68CL5 300 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 ZNF572Q7Z3I7 529 aaPredicted RBP13.34□□□□□ -0.27
SF3A1-201ENST00000215793 TAS2R7Q9NYW3 318 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 VNN1O95497 513 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 HCAR3P49019 387 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 KHKP50053 298 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 HERVK_113P63132 956 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 ARF5P84085 180 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 TMEM214Q6NUQ4 689 aaKnown RBP13.34□□□□□ -0.27
SF3A1-201ENST00000215793 USP30Q70CQ3 517 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 OTOP2Q7RTS6 562 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 NATD1Q8N6N6 113 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 ZNF570Q96NI8 536 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 EFCAB11Q9BUY7 163 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 ERVK-6Q9BXR3 956 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 OSBPL2Q9H1P3 480 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 DPEP2Q9H4A9 486 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 ITM2CQ9NQX7 267 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 POLR3BQ9NW08 1133 aaPredicted RBP13.34□□□□□ -0.27
SF3A1-201ENST00000215793 EURLQ9NYK6 297 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 ZNF221Q9UK13 617 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 DGKBQ9Y6T7 804 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 hCG_2039718K7EN88 272 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 IL7RP16871 459 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 SEPHS1P49903 392 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 SOWAHAQ2M3V2 549 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 EIPR1Q53HC9 387 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 CYP2U1Q7Z449 544 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 NAT8LQ8N9F0 302 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 TTLQ8NG68 377 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 OR5K1Q8NHB7 308 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 RAB2BQ8WUD1 216 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 RIT1Q92963 219 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 PIWIL1Q96J94 861 aaKnown RBP13.34□□□□□ -0.27
SF3A1-201ENST00000215793 CAMK1GQ96NX5 476 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 PHF12Q96QT6 1004 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 CD320Q9NPF0 282 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 OSER1Q9NX31 292 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 CD2P06729 351 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 PRPS1L1P21108 318 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 GRK6P43250 576 aa13.34□□□□□ -0.27
SF3A1-201ENST00000215793 DNASE1L1P49184 302 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms