RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 CRYMQ14894 314 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 HIF1AQ16665 826 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 SPANXN3Q5MJ09 141 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 TMEM164Q5U3C3 297 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 ZNF470Q6ECI4 717 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 PTRHD1Q6GMV3 140 aaKnown RBP16.96■□□□□ 0.31
MRPL28-201ENST00000199706 DUS1LQ6P1R4 473 aaKnown RBP16.96■□□□□ 0.31
MRPL28-201ENST00000199706 CENPUQ71F23 418 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 GALNT7Q86SF2 657 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 OOSP2Q86WS3 158 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 KMT5CQ86Y97 462 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 TBC1D21Q8IYX1 336 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 OTUD6BQ8N6M0 293 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.96■□□□□ 0.31
MRPL28-201ENST00000199706 RCBTB1Q8NDN9 531 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 UBXN4Q92575 508 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 TEFMQ96QE5 360 aaKnown RBP16.96■□□□□ 0.31
MRPL28-201ENST00000199706 ZPBPQ9BS86 351 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 TRIM51Q9BSJ1 452 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 ASPSCR1Q9BZE9 553 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 PHACTR1Q9C0D0 580 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 TWSG1Q9GZX9 223 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 LATS2Q9NRM7 1088 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 SIDT1Q9NXL6 827 aaKnown RBP16.96■□□□□ 0.31
MRPL28-201ENST00000199706 WHRNQ9P202 907 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 PISDQ9UG56 409 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 CDC23Q9UJX2 597 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 CDYLQ9Y232 598 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 SSUH2Q9Y2M2 353 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 CFAP20Q9Y6A4 193 aaKnown RBP16.96■□□□□ 0.31
MRPL28-201ENST00000199706 COMMD10Q9Y6G5 202 aa16.96■□□□□ 0.31
MRPL28-201ENST00000199706 ADAMTS20P59510 1910 aa16.96■□□□□ 0.3
MRPL28-201ENST00000199706 FAM208BQ5VWN6 2430 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 TLCD2A6NGC4 264 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 EFCAB8A8MWE9 144 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 E7ESA3 106 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 RPN2P04844 631 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 FGF3P11487 239 aaPredicted RBP16.95■□□□□ 0.3
MRPL28-201ENST00000199706 TYRP1P17643 537 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 GFERP55789 205 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 DHX9Q08211 1270 aaKnown RBP16.95■□□□□ 0.3
MRPL28-201ENST00000199706 THOC5Q13769 683 aaKnown RBP16.95■□□□□ 0.3
MRPL28-201ENST00000199706 TUBB2AQ13885 445 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 KRT33BQ14525 404 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 GBX1Q14549 363 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 PLEKHS1Q5SXH7 462 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 CYB5D1Q6P9G0 228 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 UNC5DQ6UXZ4 953 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 KIAA0408Q6ZU52 694 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 LDB1Q86U70 411 aaPredicted RBP16.95■□□□□ 0.3
MRPL28-201ENST00000199706 CNTN4Q8IWV2 1026 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 OR5K2Q8NHB8 316 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 KLHL6Q8WZ60 621 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 C16orf45Q96MC5 204 aaPredicted RBP16.95■□□□□ 0.3
MRPL28-201ENST00000199706 TAAR9Q96RI9 348 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 ERP44Q9BS26 406 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 TUBB2BQ9BVA1 445 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 TRIT1Q9H3H1 467 aaKnown RBP16.95■□□□□ 0.3
MRPL28-201ENST00000199706 FBXO8Q9NRD0 319 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 MRFAP1Q9Y605 127 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 TEX264Q9Y6I9 313 aa16.95■□□□□ 0.3
MRPL28-201ENST00000199706 S1PR4O95977 384 aa16.94■□□□□ 0.3
MRPL28-201ENST00000199706 HGFP14210 728 aa16.94■□□□□ 0.3
MRPL28-201ENST00000199706 SLC5A2P31639 672 aa16.94■□□□□ 0.3
MRPL28-201ENST00000199706 PPM1FP49593 454 aaPredicted RBP16.94■□□□□ 0.3
MRPL28-201ENST00000199706 ITGA8P53708 1063 aa16.94■□□□□ 0.3
MRPL28-201ENST00000199706 EIF3BP55884 814 aaKnown RBP16.94■□□□□ 0.3
MRPL28-201ENST00000199706 ARL4CP56559 192 aa16.94■□□□□ 0.3
MRPL28-201ENST00000199706 MC2RQ01718 297 aa16.94■□□□□ 0.3
MRPL28-201ENST00000199706 WHAMMP3Q1A5X7 153 aa16.94■□□□□ 0.3
MRPL28-201ENST00000199706 MSS51Q4VC12 460 aa16.94■□□□□ 0.3
MRPL28-201ENST00000199706 CTSL3PQ5NE16 218 aa16.94■□□□□ 0.3
MRPL28-201ENST00000199706 STEAP4Q687X5 459 aa16.94■□□□□ 0.3
MRPL28-201ENST00000199706 OTOAQ7RTW8 1153 aa16.94■□□□□ 0.3
MRPL28-201ENST00000199706 LKAAEAR1Q8TD35 194 aa16.94■□□□□ 0.3
MRPL28-201ENST00000199706 LCN9Q8WX39 176 aa16.94■□□□□ 0.3
MRPL28-201ENST00000199706 TGM7Q96PF1 710 aa16.94■□□□□ 0.3
MRPL28-201ENST00000199706 TRIM56Q9BRZ2 755 aaKnown RBP16.94■□□□□ 0.3
MRPL28-201ENST00000199706 HRASLS2Q9NWW9 162 aa16.94■□□□□ 0.3
MRPL28-201ENST00000199706 UBA6A0AVT1 1052 aaPredicted RBP16.93■□□□□ 0.3
MRPL28-201ENST00000199706 C9orf172C9J069 976 aa16.93■□□□□ 0.3
MRPL28-201ENST00000199706 GOLGA8KD6RF30 607 aa16.93■□□□□ 0.3
MRPL28-201ENST00000199706 GOLGA8TH3BQL2 631 aa16.93■□□□□ 0.3
MRPL28-201ENST00000199706 CCL4P13236 92 aa16.93■□□□□ 0.3
MRPL28-201ENST00000199706 PKMP14618 531 aaKnown RBP16.93■□□□□ 0.3
MRPL28-201ENST00000199706 ITIH1P19827 911 aa16.93■□□□□ 0.3
MRPL28-201ENST00000199706 SHMT2P34897 504 aa16.93■□□□□ 0.3
MRPL28-201ENST00000199706 ETV5P41161 510 aa16.93■□□□□ 0.3
MRPL28-201ENST00000199706 RPL21P46778 160 aaKnown RBP16.93■□□□□ 0.3
MRPL28-201ENST00000199706 UCNP55089 124 aa16.93■□□□□ 0.3
MRPL28-201ENST00000199706 HSPA14Q0VDF9 509 aa16.93■□□□□ 0.3
MRPL28-201ENST00000199706 FOXR1Q6PIV2 292 aa16.93■□□□□ 0.3
MRPL28-201ENST00000199706 LRRC69Q6ZNQ3 347 aa16.93■□□□□ 0.3
MRPL28-201ENST00000199706 KCNMB4Q86W47 210 aa16.93■□□□□ 0.3
MRPL28-201ENST00000199706 OR52E1Q8NGJ3 308 aa16.93■□□□□ 0.3
MRPL28-201ENST00000199706 KCNE4Q8WWG9 221 aa16.93■□□□□ 0.3
MRPL28-201ENST00000199706 KCNJ9Q92806 393 aa16.93■□□□□ 0.3
MRPL28-201ENST00000199706 SLC41A2Q96JW4 573 aa16.93■□□□□ 0.3
MRPL28-201ENST00000199706 FERD3LQ96RJ6 166 aa16.93■□□□□ 0.3
MRPL28-201ENST00000199706 RAB17Q9H0T7 212 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms