RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 NTMT1Q9BV86 223 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 SLC2A11Q9BYW1 496 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 FAM192AQ9GZU8 254 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 SEMA6AQ9H2E6 1030 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 ACTR8Q9H981 624 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 SMOXQ9NWM0 555 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 MARK1Q9P0L2 795 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 EGFL7Q9UHF1 273 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 CD84Q9UIB8 345 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 PCDHA9Q9Y5H5 950 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 WNT6Q9Y6F9 365 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 KIAA0100Q14667 2235 aaKnown RBP8.1□□□□□ -1.11
VAMP3-201ENST00000054666 DOCK6Q96HP0 2047 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 PLXNB3Q9ULL4 1909 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 KANSL1LA0AUZ9 987 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 H0YJX3 145 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 ZNF197O14709 1029 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 HNRNPRO43390 633 aaKnown RBP8.1□□□□□ -1.11
VAMP3-201ENST00000054666 NUAK1O60285 661 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 MOSPD3O75425 235 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 FTH1P02794 183 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 GPIP06744 558 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 MPC1LP0DKB6 136 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 FCGR1AP12314 374 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 ATP1B2P14415 290 aaPredicted RBP8.1□□□□□ -1.11
VAMP3-201ENST00000054666 SLC2A4P14672 509 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 JAK1P23458 1154 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 VARSP26640 1264 aaKnown RBP8.1□□□□□ -1.11
VAMP3-201ENST00000054666 CCR7P32248 378 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 GDF5P43026 501 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 GSK3BP49841 420 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 HNMTP50135 292 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 CDKL1Q00532 357 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 B4GALNT1Q00973 533 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 LIPEQ05469 1076 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 PAGE3Q5JUK9 113 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 PLEKHS1Q5SXH7 462 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 MBOAT1Q6ZNC8 495 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 ERMP1Q7Z2K6 904 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 IFNEQ86WN2 208 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 GALNT13Q8IUC8 556 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 NAT16Q8N8M0 369 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 TIFAQ96CG3 184 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 CNBD2Q96M20 576 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 UHRF1Q96T88 793 aaPredicted RBP8.1□□□□□ -1.11
VAMP3-201ENST00000054666 TMEM106CQ9BVX2 250 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 FAM83DQ9H4H8 585 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 SLC32A1Q9H598 525 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 PARVBQ9HBI1 364 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 SLC52A3Q9NQ40 469 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 ARMC1Q9NVT9 282 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 DPP7Q9UHL4 492 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 ZNF490Q9ULM2 529 aaPredicted RBP8.1□□□□□ -1.11
VAMP3-201ENST00000054666 ST14Q9Y5Y6 855 aa8.1□□□□□ -1.11
VAMP3-201ENST00000054666 ASPDHA6ND91 283 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 KIF1CO43896 1103 aaKnown RBP8.09□□□□□ -1.11
VAMP3-201ENST00000054666 LEFTY1O75610 366 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 TIPRLO75663 272 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 AP2A2O94973 939 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 CLDN9O95484 217 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 ASLP04424 464 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 TCF3P15923 654 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 AOAHP28039 575 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 GNPDA1P46926 289 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 ZFP36L2P47974 494 aaKnown RBP8.09□□□□□ -1.11
VAMP3-201ENST00000054666 ST8SIA6P61647 398 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 TLR1Q15399 786 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 SYTL3Q4VX76 610 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 RABL3Q5HYI8 236 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 RFLNAQ6ZTI6 216 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 SPPL2CQ8IUH8 684 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 DPP10Q8N608 796 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 GLB1L3Q8NCI6 653 aaPredicted RBP8.09□□□□□ -1.11
VAMP3-201ENST00000054666 WFIKKN2Q8TEU8 576 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 CYB5D2Q8WUJ1 264 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 CANT1Q8WVQ1 401 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 ELMO1Q92556 727 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 SLCO4A1Q96BD0 722 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 MAGEB10Q96LZ2 347 aaPredicted RBP8.09□□□□□ -1.11
VAMP3-201ENST00000054666 ZSCAN5AQ9BUG6 496 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 SLC12A9Q9BXP2 914 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 DPY30Q9C005 99 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 YIPF3Q9GZM5 350 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 LINC00597Q9H2U6 94 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 LRTM1Q9HBL6 345 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 CCM2LQ9NUG4 571 aaPredicted RBP8.09□□□□□ -1.11
VAMP3-201ENST00000054666 CXXC1Q9P0U4 656 aaPredicted RBP8.09□□□□□ -1.11
VAMP3-201ENST00000054666 IL36AQ9UHA7 158 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 PDE10AQ9Y233 779 aa8.09□□□□□ -1.11
VAMP3-201ENST00000054666 LOC730098B7Z3J9 87 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 MANBAO00462 879 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 INPP4BO15327 924 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 SLC16A5O15375 505 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 GMNNO75496 209 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 ARHGEF15O94989 841 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 KCNH1O95259 989 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 TNFAIP8O95379 198 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 ADH1CP00326 375 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 CAPNS1P04632 268 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 PIM1P11309 404 aaPredicted RBP8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms