RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Adh6bA0A1D5RMB0 384 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 A6H6Q4 206 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Gm20441G3UYJ7 252 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Olfr237-ps1K9J725 310 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Lrrc23O35125 340 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Znf143O70230 638 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Hcn1O88704 910 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Matn4O89029 624 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 H2-Q8P14430 326 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Vps26aP40336 327 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Gadd45aP48316 165 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 H2-Q6P79568 326 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 SynaQ5G5D5 617 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Znrf3Q5SSZ7 913 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ca4Q64444 305 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Fam126aQ6P9N1 521 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Tas2r131Q7M708 310 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Defb34Q7TNV8 81 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Gpr142Q7TQN9 365 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Olfr1085Q7TR64 313 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Insig1Q8BGI3 259 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Fignl1Q8BPY9 683 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Kyat1Q8BTY1 424 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Rbms3Q8BWL5 431 aaKnown RBP9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Actr8Q8R2S9 624 aaKnown RBP9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Tmem161aQ8VCA6 480 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Olfr854Q8VFF1 315 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Olfr352Q8VGJ9 315 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Znf639Q99KZ6 485 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Duoxa2Q9D311 320 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Tmprss6Q9DBI0 811 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Rdh11Q9QYF1 316 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Gm45861A0A1B0GRY3 1923 aa9.64□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Vsig10lD3YZF7 868 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Acbd4E9Q289 327 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 2210016F16RikG3X8U3 338 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Prickle1Q3U5C7 832 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Mapkapk3Q3UMW7 384 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 G2e3Q5RJY2 716 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 MtdhQ80WJ7 579 aaKnown RBP9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Q8BWQ6 963 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Abi3Q8BYZ1 367 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Gpr22Q8BZL4 432 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Znf668Q8K2R5 619 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Lsm1Q8VC85 133 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Q9CXL3 195 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Cntd1Q9D995 334 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Prmt1Q9JIF0 371 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Wdr12Q9JJA4 423 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Dnajb9Q9QYI6 222 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Vmn1r49Q9WUF1 310 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Clic1Q9Z1Q5 241 aaKnown RBP9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Trpm7Q923J1 1863 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Kcng1A2BDX4 514 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Nipsnap3aB1AWZ3 247 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Dlgap4B1AZP2 992 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Neurod4O09105 330 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Lhx8O35652 367 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Hmga1P17095 107 aaKnown RBP9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Aldh2P47738 519 aaKnown RBP9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Nudt2P56380 147 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Btbd1P58544 488 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Lpcat1Q3TFD2 534 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Fubp3Q3TIX6 575 aaKnown RBP9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Gdpgp1Q3TLS3 386 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Shcbp1lQ3TTP0 639 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Hdgfl2Q3UMU9 669 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Nfe2l2Q60795 597 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Skiv2lQ6NZR5 1244 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Zfp438Q8BFX2 798 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 1700020N01RikQ8CF20 87 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ago1Q8CJG1 857 aaKnown RBP9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Trib2Q8K4K3 343 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Ugt2b1Q8R084 529 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Asz1Q8VD46 475 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Fastkd2Q922E6 689 aaKnown RBP9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Atp13a2Q9CTG6 1169 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Themis3Q9CU24 569 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Nos1apQ9D3A8 503 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Slco6d1Q9D5W6 683 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Cmtm7Q9ESD6 167 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Nipa2Q9JJC8 359 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Baz2bA2AUY4 2123 aa9.63□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Oas1eA0A0J9YV76 386 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Kcna10B2RQA1 511 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Vmn2r90E9PXJ8 863 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Gm4847G3X946 537 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 PigfO09101 219 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Fth1P09528 182 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Dnal1Q05A62 190 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Foxk2Q3UCQ1 651 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Hephl1Q3V1H3 1159 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Usp17laQ61068 526 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Rasgrp3Q6NZH9 691 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Tmem169Q8BG50 297 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Prox2Q8BII1 593 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Smarcal1Q8BJL0 910 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 HadhaQ8BMS1 763 aaKnown RBP9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 MfrpQ8K480 584 aa9.62□□□□□ -0.87
Ccdc40-202ENSMUST00000053440 Zfp940Q8R2Q3 566 aa9.62□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms