RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Steap3Q8CI59 488 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 GaleQ8R059 347 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 WwoxQ91WL8 414 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Slc13a3Q91Y63 600 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Npffr2Q924H0 417 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Riok2Q9CQS5 547 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Yif1bQ9CX30 311 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 Ccdc77Q9CZH8 489 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 2610042L04RikQ9D073 150 aa13.22□□□□□ -0.29
Nup88-201ENSMUST00000035283 4933424G06RikA0A140LIP3 267 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Dlgap4B1AZP2 992 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Kcna10B2RQA1 511 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Mterf1bB9EJ57 379 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gm8237E9Q257 205 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Alkal1J3QPP8 127 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Rhox2hK7N6P1 191 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 AlyrefO08583 255 aaKnown RBP13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 RbpjlO08674 515 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 PigfO09101 219 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Cyp2c38P56655 490 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 BcheQ03311 603 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Afg1lQ3V384 480 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Krtcap2Q5RL79 136 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Znrf3Q5SSZ7 913 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Adora2bQ60614 332 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Trpc1Q61056 793 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Prkd1Q62101 918 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tusc1Q673H1 205 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Apex2Q68G58 516 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Galnt2Q6PB93 570 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Rxfp4Q7TQP4 414 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 TiprlQ8BH58 271 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tspan12Q8BKT6 305 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Ncs1Q8BNY6 190 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Map4k5Q8BPM2 847 aaKnown RBP13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Trim31Q8R0K2 507 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Rbms2Q8VC70 383 aaKnown RBP13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tmem161aQ8VCA6 480 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 PxnQ8VI36 591 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Depdc7Q91WS7 511 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Kiaa2013Q91X21 634 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Trpd52l3Q9CQ14 231 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Det1Q9D0A0 550 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gbe1Q9D6Y9 702 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Trhr2Q9ERT2 382 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 C1qtnf3Q9ES30 246 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tas2r119Q9JKT2 335 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tgm1Q9JLF6 815 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tmeff2Q9QYM9 374 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Cep350E9Q309 3095 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Rad21l1A2AU37 552 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gm4871D3Z0W7 314 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Cilp2D3Z7H8 1162 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Rpl3lE9PWZ3 407 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Vmn2r35E9Q7U8 861 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gm44G3UW88 330 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Vmn2r8L7N472 848 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Pbx3O35317 434 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 MaffO54791 156 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gtf2h4O70422 463 aaKnown RBP13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Orm2P07361 207 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tap1P21958 724 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Smpdl3bP58242 456 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Crisp1Q03401 244 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 G2e3Q5RJY2 716 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 RadilQ69Z89 1099 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Zfp324Q78F42 583 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tbc1d10bQ8BHL3 798 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Q8BWQ6 963 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Rbm4Q8C7Q4 361 aaKnown RBP13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Rcor1Q8CFE3 480 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Ugt2b1Q8R084 529 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 RhoqQ8R527 205 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Rbm4bQ8VE92 357 aaKnown RBP13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Sp7Q8VI67 428 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Fuca2Q99KR8 461 aa13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Rpl38Q9JJI8 70 aaKnown RBP13.21□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gm43796A0A0J9YV32 372 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Vmn2r73D3Z7M3 851 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Pate1E9Q658 125 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Maml2F6U238 1170 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Nccrp1G3X9C2 266 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Nsmce4aG3XA30 381 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Olfr743L7N1Y2 311 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Hpcal1P62748 193 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Emx2Q04744 253 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Trmt10cQ3UFY8 414 aaKnown RBP13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Tbc1d24Q3UUG6 561 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Zbtb2Q3V3W4 514 aaKnown RBP13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Sfmbt2Q5DTW2 938 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Ipcef1Q5DU31 406 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Rnf43Q5NCP0 784 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 ManealQ6P1J0 452 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Rcn3Q8BH97 328 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Lpcat2Q8BYI6 544 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 PglsQ9CQ60 257 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Itgb3bpQ9CQ82 176 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Abcb8Q9CXJ4 717 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 PlgrktQ9D3P8 147 aa13.2□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cnbd2Q9D5U8 673 aa13.2□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms