RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 PCGF5Q86SE9 256 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 NLRP8Q86W28 1048 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 PLXDC1Q8IUK5 500 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 PHYKPLQ8IUZ5 450 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 PPIL6Q8IXY8 311 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 CNTD1Q8N815 330 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 CPT1CQ8TCG5 803 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 CT55Q8WUE5 264 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 PPP1R2P1Q96PQ5 205 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 PARD6BQ9BYG5 372 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-222ENST00000641587 POLR1EQ9GZS1 481 aaKnown RBP9.83□□□□□ -0.84
PHGDH-222ENST00000641587 TWSG1Q9GZX9 223 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 ETNK1Q9HBU6 452 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 KLC4Q9NSK0 619 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 UBP1Q9NZI7 540 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 LUZP4Q9P127 313 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 WHRNQ9P202 907 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 ZNF624Q9P2J8 865 aaPredicted RBP9.83□□□□□ -0.84
PHGDH-222ENST00000641587 MTRF1LQ9UGC7 380 aaKnown RBP9.83□□□□□ -0.84
PHGDH-222ENST00000641587 NFU1Q9UMS0 254 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 VPS4AQ9UN37 437 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 DNAJC16Q9Y2G8 782 aa9.83□□□□□ -0.84
PHGDH-222ENST00000641587 PIPSLA2A3N6 862 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 OR52A4PA6NMU1 304 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 GOLGA8MH3BSY2 632 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 PSMD3O43242 534 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 NUAK1O60285 661 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 MTX2O75431 263 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 PMPCBO75439 489 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 SPAG6O75602 509 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 UBXN7O94888 489 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 SLC4A1P02730 911 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 PYGLP06737 847 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 AMD1P17707 334 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 COL8A1P27658 744 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 CD86P42081 329 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 CARSP49589 748 aaKnown RBP9.82□□□□□ -0.84
PHGDH-222ENST00000641587 GEMP55040 296 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 VSNL1P62760 191 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 CAV1Q03135 178 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 SEMA5AQ13591 1074 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 KCNAB1Q14722 419 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 MORF4L2Q15014 288 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 PCSK7Q16549 785 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 RNASEH2BQ5TBB1 312 aaKnown RBP9.82□□□□□ -0.84
PHGDH-222ENST00000641587 FHL5Q5TD97 284 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 FAM199XQ6PEV8 388 aaPredicted RBP9.82□□□□□ -0.84
PHGDH-222ENST00000641587 PPP1R21Q6ZMI0 780 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 FAM92BQ6ZTR7 304 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 TMEM26Q6ZUK4 368 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 GSPT2Q8IYD1 628 aaKnown RBP9.82□□□□□ -0.84
PHGDH-222ENST00000641587 NDUFAF2Q8N183 169 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 EFCAB3Q8N7B9 438 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 IPMKQ8NFU5 416 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 SPATA22Q8NHS9 363 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 ARRDC2Q8TBH0 407 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 CPT1BQ92523 772 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 EID2BQ96D98 161 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 FCRL5Q96RD9 977 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 FSD1LQ9BXM9 530 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 SLC25A51Q9H1U9 297 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 OR2AG1Q9H205 316 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 ACTL8Q9H568 366 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 ZNF768Q9H5H4 540 aaKnown RBP9.82□□□□□ -0.84
PHGDH-222ENST00000641587 LHX9Q9NQ69 397 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 GRHL1Q9NZI5 618 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 SHOC2Q9UQ13 582 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 HIVEP3Q5T1R4 2406 aa9.82□□□□□ -0.84
PHGDH-222ENST00000641587 PDZK1P1A8MUH7 402 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 MT-CYBP00156 380 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-222ENST00000641587 VIPP01282 170 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 TUBBP07437 444 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 PIRTP0C851 137 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 FGF5P12034 268 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 SLC2A4P14672 509 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 BRAFP15056 766 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 TPSB2P20231 275 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 IVDP26440 423 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 RPL10P27635 214 aaKnown RBP9.81□□□□□ -0.84
PHGDH-222ENST00000641587 CAPZBP47756 277 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 DRG2P55039 364 aaKnown RBP9.81□□□□□ -0.84
PHGDH-222ENST00000641587 MRPL49Q13405 166 aaKnown RBP9.81□□□□□ -0.84
PHGDH-222ENST00000641587 IL10RAQ13651 578 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 GALNT3Q14435 633 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 SPARCL1Q14515 664 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 KCNJ11Q14654 390 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 TPSAB1Q15661 275 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 QPCTQ16769 361 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 INSCQ1MX18 579 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 KHDC1Q4VXA5 237 aaKnown RBP9.81□□□□□ -0.84
PHGDH-222ENST00000641587 CACHD1Q5VU97 1274 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 ANKRD22Q5VYY1 191 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 CRYBG3Q68DQ2 2970 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 ZNF787Q6DD87 383 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 ALG1LQ6GMV1 187 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 HIBCHQ6NVY1 386 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-222ENST00000641587 WDR93Q6P2C0 686 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 CERS6Q6ZMG9 384 aa9.81□□□□□ -0.84
PHGDH-222ENST00000641587 HOOK3Q86VS8 718 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms