RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 IER5LQ5T953 404 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 AGBL4Q5VU57 503 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 SEL1L3Q68CR1 1132 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 PTCRAQ6ISU1 281 aaPredicted RBP8.7□□□□□ -1.02
PHGDH-219ENST00000641513 TMEM220Q6QAJ8 160 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 ZNF765Q7L2R6 523 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 MAVSQ7Z434 540 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 ADAMTSL2Q86TH1 951 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 TRIM74Q86UV6 250 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 FAM124AQ86V42 546 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 BEND7Q8N7W2 519 aaPredicted RBP8.7□□□□□ -1.02
PHGDH-219ENST00000641513 RASGEF1AQ8N9B8 481 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 OR14C36Q8NHC7 312 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 RPLP0P6Q8NHW5 317 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 DTX3LQ8TDB6 740 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 KCNV2Q8TDN2 545 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 KLK6Q92876 244 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 FUBP1Q96AE4 644 aaKnown RBP8.7□□□□□ -1.02
PHGDH-219ENST00000641513 L3HYPDHQ96EM0 354 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 PPP1R36Q96LQ0 422 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 ZNF184Q99676 751 aaPredicted RBP8.7□□□□□ -1.02
PHGDH-219ENST00000641513 GABRG3Q99928 467 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 EGFL8Q99944 293 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 EBF4Q9BQW3 602 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 ERVK-6Q9BXR3 956 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 ZNF385DQ9H6B1 395 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 FBRSQ9HAH7 460 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 NUDT4Q9NZJ9 180 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 ARMCX1Q9P291 453 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 SERGEFQ9UGK8 458 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 SLC7A8Q9UHI5 535 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 BCAP29Q9UHQ4 241 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 NCKAP1Q9Y2A7 1128 aa8.7□□□□□ -1.02
PHGDH-219ENST00000641513 A0A088AWK7 358 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 CCDC189A1A4V9 331 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 LRRC14BA6NHZ5 514 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 C19orf67A6NJJ6 358 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 K7ESM1 405 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 GIPC1O14908 333 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 AP1G1O43747 822 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 PEX1O43933 1283 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 RNGTTO60942 597 aaKnown RBP8.69□□□□□ -1.02
PHGDH-219ENST00000641513 ADAM23O75077 832 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 ATG13O75143 517 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 CRCPO75575 148 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 KRT36O76013 467 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 CDK14O94921 469 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 GUCA1CO95843 209 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 CBSLP0DN79 551 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 THRAP10827 490 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 PIM1P11309 404 aaPredicted RBP8.69□□□□□ -1.02
PHGDH-219ENST00000641513 SRFP11831 508 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 CD72P21854 359 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 CCR7P32248 378 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 CBSP35520 551 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 CDH13P55290 713 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 TAS2R38P59533 333 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 NAA20P61599 178 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 NFKB2Q00653 900 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 KLC1Q07866 573 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 SGCGQ13326 291 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 SMAD2Q15796 467 aaKnown RBP8.69□□□□□ -1.02
PHGDH-219ENST00000641513 PDCD2Q16342 344 aaPredicted RBP8.69□□□□□ -1.02
PHGDH-219ENST00000641513 SLC44A4Q53GD3 710 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 VWA5B1Q5TIE3 1220 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 ANKS6Q68DC2 871 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 NXNQ6DKJ4 435 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 DOK6Q6PKX4 331 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 ATG14Q6ZNE5 492 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 RIPOR1Q6ZS17 1223 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 FRMD7Q6ZUT3 714 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 ACAD11Q709F0 780 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 UBE2R2Q712K3 238 aaPredicted RBP8.69□□□□□ -1.02
PHGDH-219ENST00000641513 CUZD1Q86UP6 607 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 TRAPPC5Q8IUR0 188 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 LSMEM2Q8N112 164 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 PELI3Q8N2H9 469 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 PGBD3Q8N328 593 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 FLCNQ8NFG4 579 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 WDR60Q8WVS4 1066 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 SIPA1Q96FS4 1042 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 PDLIM5Q96HC4 596 aaKnown RBP8.69□□□□□ -1.02
PHGDH-219ENST00000641513 HIC2Q96JB3 615 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 SERPINI1Q99574 410 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 CCM2Q9BSQ5 444 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 TRMOQ9BU70 441 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 MKRN2Q9H000 416 aaKnown RBP8.69□□□□□ -1.02
PHGDH-219ENST00000641513 OR2AG1Q9H205 316 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 VCXQ9H320 206 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 GSTO2Q9H4Y5 243 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 ZDHHC2Q9UIJ5 367 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 MBD1Q9UIS9 605 aaPredicted RBP8.69□□□□□ -1.02
PHGDH-219ENST00000641513 ADAMTS6Q9UKP5 1117 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 CA14Q9ULX7 337 aa8.69□□□□□ -1.02
PHGDH-219ENST00000641513 FANCMQ8IYD8 2048 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 TBC1D3DA0A087WVF3 549 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 TBC1D3IA0A087WXS9 549 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 TBC1D3EA0A087X179 549 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 TBC1D3KA0A087X1G2 549 aa8.68□□□□□ -1.02
PHGDH-219ENST00000641513 A0A1W2PQF6 199 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms