RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 C1orf61Q13536 156 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 ZNF549Q6P9A3 640 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 CMC1Q7Z7K0 106 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 LCA5Q86VQ0 697 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 SPATS2Q86XZ4 545 aaKnown RBP12.7□□□□□ -0.38
PHGDH-218ENST00000641491 IQCKQ8N0W5 287 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 ZNF548Q8NEK5 533 aaPredicted RBP12.7□□□□□ -0.38
PHGDH-218ENST00000641491 CD200R1Q8TD46 325 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 ALKBH8Q96BT7 664 aaKnown RBP12.7□□□□□ -0.38
PHGDH-218ENST00000641491 SCARF2Q96GP6 870 aaPredicted RBP12.7□□□□□ -0.38
PHGDH-218ENST00000641491 LRRC61Q9BV99 259 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 TM7SF3Q9NS93 570 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 IMP3Q9NV31 184 aaKnown RBP12.7□□□□□ -0.38
PHGDH-218ENST00000641491 LGALS13Q9UHV8 139 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 MID2Q9UJV3 735 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 COLEC10Q9Y6Z7 277 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 FANCMQ8IYD8 2048 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 SCN8AQ9UQD0 1980 aa12.7□□□□□ -0.38
PHGDH-218ENST00000641491 ZNF106Q9H2Y7 1883 aaKnown RBP12.7□□□□□ -0.38
PHGDH-218ENST00000641491 CHD8Q9HCK8 2581 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 SYCE1LA8MT33 242 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 PATE3B3GLJ2 98 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 BTN3A1O00481 513 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 FFAR2O15552 330 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 ZBTB14O43829 449 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 GLRA3O75311 464 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 PIAS2O75928 621 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 VIPP01282 170 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 C8GP07360 202 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 LTA4HP09960 611 aaKnown RBP12.69□□□□□ -0.38
PHGDH-218ENST00000641491 MPC1LP0DKB6 136 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 PYGBP11216 843 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 COL6A2P12110 1019 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 ZNF37AP17032 561 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-218ENST00000641491 KRT4P19013 534 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 AK4P27144 223 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-218ENST00000641491 RPL10P27635 214 aaKnown RBP12.69□□□□□ -0.38
PHGDH-218ENST00000641491 NDUFS1P28331 727 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 EPHA8P29322 1005 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-218ENST00000641491 SLC26A3P40879 764 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 CCNFP41002 786 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 CLCN7P51798 805 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 DMPKQ09013 629 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 SPEM2Q0P670 501 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 CSHL1Q14406 222 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 ZNF460Q14592 562 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 PLCL1Q15111 1095 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 ST3GAL2Q16842 350 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 ZNF423Q2M1K9 1284 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 TPRG1LQ5T0D9 272 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 PAQR3Q6TCH7 311 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 NAPRTQ6XQN6 538 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 TIFABQ6ZNK6 161 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 NEK10Q6ZWH5 1172 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 ADAMTSL2Q86TH1 951 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 SLC9B2Q86UD5 537 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 ZNF547Q8IVP9 402 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 MINDY1Q8N5J2 469 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 SUMF1Q8NBK3 374 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 MAPK15Q8TD08 544 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 LKAAEAR1Q8TD35 194 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 ZDHHC1Q8WTX9 485 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 ZBTB9Q96C00 473 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 CCDC97Q96F63 343 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-218ENST00000641491 PGM2Q96G03 612 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 C12orf66Q96MD2 445 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 OLFM1Q99784 485 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 EDEM2Q9BV94 578 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 WWP1Q9H0M0 922 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 TRIT1Q9H3H1 467 aaKnown RBP12.69□□□□□ -0.38
PHGDH-218ENST00000641491 CAPN10Q9HC96 672 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 KCNK9Q9NPC2 374 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 NCKIPSDQ9NZQ3 722 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 TAAR2Q9P1P5 351 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 RNF112Q9ULX5 631 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 PSMD13Q9UNM6 376 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 ASF1AQ9Y294 204 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 THADAQ6YHU6 1953 aa12.69□□□□□ -0.38
PHGDH-218ENST00000641491 KIR2DS5A0A0G2JLQ3 304 aa12.68□□□□□ -0.38
PHGDH-218ENST00000641491 A0A0G2JNG1 304 aa12.68□□□□□ -0.38
PHGDH-218ENST00000641491 A0A1B0GTQ1 180 aa12.68□□□□□ -0.38
PHGDH-218ENST00000641491 ZNF839A8K0R7 811 aa12.68□□□□□ -0.38
PHGDH-218ENST00000641491 GOLGA8RI6L899 631 aa12.68□□□□□ -0.38
PHGDH-218ENST00000641491 KIR2DS3K7RE56 304 aa12.68□□□□□ -0.38
PHGDH-218ENST00000641491 SYF2O95926 243 aaKnown RBP12.68□□□□□ -0.38
PHGDH-218ENST00000641491 C1QAP02745 245 aa12.68□□□□□ -0.38
PHGDH-218ENST00000641491 C2P06681 752 aa12.68□□□□□ -0.38
PHGDH-218ENST00000641491 GSTA1P08263 222 aa12.68□□□□□ -0.38
PHGDH-218ENST00000641491 ZNF806P0C7X5 589 aa12.68□□□□□ -0.38
PHGDH-218ENST00000641491 NEFHP12036 1026 aa12.68□□□□□ -0.38
PHGDH-218ENST00000641491 TAC1P20366 129 aa12.68□□□□□ -0.38
PHGDH-218ENST00000641491 GCAP28676 217 aa12.68□□□□□ -0.38
PHGDH-218ENST00000641491 RXRGP48443 463 aa12.68□□□□□ -0.38
PHGDH-218ENST00000641491 ABRQ12979 859 aa12.68□□□□□ -0.38
PHGDH-218ENST00000641491 SP140Q13342 867 aa12.68□□□□□ -0.38
PHGDH-218ENST00000641491 KIR2DS5Q14953 304 aa12.68□□□□□ -0.38
PHGDH-218ENST00000641491 ZKSCAN8Q15776 578 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-218ENST00000641491 DEFB133Q30KQ1 61 aa12.68□□□□□ -0.38
PHGDH-218ENST00000641491 PRAMEF14Q5SWL7 426 aa12.68□□□□□ -0.38
PHGDH-218ENST00000641491 METRNLQ641Q3 311 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms