RNA–Protein interactions for RNA: ENST00000641411.1

CASC19-227, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-227ENST00000641411 C6orf163Q5TEZ5 329 aa7.53□□□□□ -1.2
CASC19-227ENST00000641411 METTL2BQ6P1Q9 378 aaKnown RBP7.53□□□□□ -1.2
CASC19-227ENST00000641411 TMEM207Q6UWW9 146 aa7.53□□□□□ -1.2
CASC19-227ENST00000641411 EFL1Q7Z2Z2 1120 aaKnown RBP7.53□□□□□ -1.2
CASC19-227ENST00000641411 KIAA0907Q7Z7F0 614 aaPredicted RBP7.53□□□□□ -1.2
CASC19-227ENST00000641411 BBS7Q8IWZ6 715 aa7.53□□□□□ -1.2
CASC19-227ENST00000641411 CMTM8Q8IZV2 173 aa7.53□□□□□ -1.2
CASC19-227ENST00000641411 PCDH20Q8N6Y1 951 aaKnown RBP7.53□□□□□ -1.2
CASC19-227ENST00000641411 MAB21L3Q8N8X9 362 aa7.53□□□□□ -1.2
CASC19-227ENST00000641411 CEP70Q8NHQ1 597 aa7.53□□□□□ -1.2
CASC19-227ENST00000641411 RP9Q8TA86 221 aaKnown RBP7.53□□□□□ -1.2
CASC19-227ENST00000641411 STAG3L4Q8TBR4 150 aa7.53□□□□□ -1.2
CASC19-227ENST00000641411 WFDC5Q8TCV5 224 aa7.53□□□□□ -1.2
CASC19-227ENST00000641411 MAPK15Q8TD08 544 aa7.53□□□□□ -1.2
CASC19-227ENST00000641411 DTX3LQ8TDB6 740 aa7.53□□□□□ -1.2
CASC19-227ENST00000641411 DDI1Q8WTU0 396 aa7.53□□□□□ -1.2
CASC19-227ENST00000641411 ANKRD49Q8WVL7 239 aa7.53□□□□□ -1.2
CASC19-227ENST00000641411 BIRC8Q96P09 236 aa7.53□□□□□ -1.2
CASC19-227ENST00000641411 MTIF3Q9H2K0 278 aaKnown RBP7.53□□□□□ -1.2
CASC19-227ENST00000641411 GSTO2Q9H4Y5 243 aa7.53□□□□□ -1.2
CASC19-227ENST00000641411 DENND2DQ9H6A0 471 aaPredicted RBP7.53□□□□□ -1.2
CASC19-227ENST00000641411 SUDS3Q9H7L9 328 aaPredicted RBP7.53□□□□□ -1.2
CASC19-227ENST00000641411 POLR3BQ9NW08 1133 aaPredicted RBP7.53□□□□□ -1.2
CASC19-227ENST00000641411 ZDHHC7Q9NXF8 308 aa7.53□□□□□ -1.2
CASC19-227ENST00000641411 KLHL3Q9UH77 587 aa7.53□□□□□ -1.2
CASC19-227ENST00000641411 ZDHHC2Q9UIJ5 367 aa7.53□□□□□ -1.2
CASC19-227ENST00000641411 MED16Q9Y2X0 877 aa7.53□□□□□ -1.2
CASC19-227ENST00000641411 A0A0J9YYE9 177 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 RGSL1A5PLK6 1076 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 AGAP14A8MT82 685 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 WASH3PC4AMC7 463 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 EIF3FO00303 357 aaPredicted RBP7.52□□□□□ -1.21
CASC19-227ENST00000641411 SDHDO14521 159 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 PRMT5O14744 637 aaPredicted RBP7.52□□□□□ -1.21
CASC19-227ENST00000641411 SLC9A3R1O14745 358 aaPredicted RBP7.52□□□□□ -1.21
CASC19-227ENST00000641411 GRM6O15303 877 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 ZBTB14O43829 449 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 VPS4BO75351 444 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 CIB2O75838 187 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 RHOBTB1O94844 696 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 TRBC1P01850 177 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 RPS17P08708 135 aaKnown RBP7.52□□□□□ -1.21
CASC19-227ENST00000641411 PIRTP0C851 137 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 HSPA8P11142 646 aaKnown RBP7.52□□□□□ -1.21
CASC19-227ENST00000641411 COX4I1P13073 169 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 MTHFD2P13995 350 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 RPL10P27635 214 aaKnown RBP7.52□□□□□ -1.21
CASC19-227ENST00000641411 SERPINA4P29622 427 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 MC4RP32245 332 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 EPHB1P54762 984 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 ERVFRD-1P60508 538 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 MAPRE2Q15555 327 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 CDKN3Q16667 212 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 LSM12Q3MHD2 195 aaKnown RBP7.52□□□□□ -1.21
CASC19-227ENST00000641411 SETMARQ53H47 684 aaPredicted RBP7.52□□□□□ -1.21
CASC19-227ENST00000641411 PITRM1Q5JRX3 1037 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 ICE2Q659A1 982 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 GRAMD4Q6IC98 578 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 PGM2L1Q6PCE3 622 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 AAGABQ6PD74 315 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 TTC23LQ6PF05 361 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 LINGO4Q6UY18 593 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 OTOP2Q7RTS6 562 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 SNX20Q7Z614 316 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 TMCO2Q7Z6W1 182 aaPredicted RBP7.52□□□□□ -1.21
CASC19-227ENST00000641411 CUZD1Q86UP6 607 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 SCUBE1Q8IWY4 988 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 RAVER1Q8IY67 606 aaKnown RBP7.52□□□□□ -1.21
CASC19-227ENST00000641411 ULK2Q8IYT8 1036 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 APCDD1Q8J025 514 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 RBFAQ8N0V3 343 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 PELI3Q8N2H9 469 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 ZNF655Q8N720 491 aaPredicted RBP7.52□□□□□ -1.21
CASC19-227ENST00000641411 CCNYL1Q8N7R7 359 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 EFHBQ8N7U6 833 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 OR2AP1Q8NGE2 309 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 SPPL3Q8TCT6 385 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 SH3RF2Q8TEC5 729 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 JADE3Q92613 823 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 PTERQ96BW5 349 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 ECHDC3Q96DC8 303 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 EXOC2Q96KP1 924 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 ZNF641Q96N77 438 aaPredicted RBP7.52□□□□□ -1.21
CASC19-227ENST00000641411 SAMD11Q96NU1 681 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 OR52B2Q96RD2 323 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 MCCC1Q96RQ3 725 aaPredicted RBP7.52□□□□□ -1.21
CASC19-227ENST00000641411 CCT7Q99832 543 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 TCF25Q9BQ70 676 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 NUSAP1Q9BXS6 441 aaKnown RBP7.52□□□□□ -1.21
CASC19-227ENST00000641411 SLC46A2Q9BY10 475 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 GPR63Q9BZJ6 419 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 P2RY12Q9H244 342 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 ALG9Q9H6U8 611 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 ZBTB26Q9HCK0 441 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 TLR9Q9NR96 1032 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 TMEM45AQ9NWC5 275 aa7.52□□□□□ -1.21
CASC19-227ENST00000641411 NFKBIL1Q9UBC1 381 aaPredicted RBP7.52□□□□□ -1.21
CASC19-227ENST00000641411 TRMT6Q9UJA5 497 aaKnown RBP7.52□□□□□ -1.21
CASC19-227ENST00000641411 PRPF19Q9UMS4 504 aaKnown RBP7.52□□□□□ -1.21
CASC19-227ENST00000641411 CRYL1Q9Y2S2 319 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms