RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 HOXD10P28358 340 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 RPL4P36578 427 aaKnown RBP8.16□□□□□ -1.1
NECAP1-227ENST00000640648 CDKN2CP42773 168 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 NAGLUP54802 743 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 CXCL9Q07325 125 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 DGKZQ13574 1117 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 ATP6AP1Q15904 470 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 ZACNQ401N2 412 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 KLHL26Q53HC5 615 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 METAP1DQ6UB28 335 aaPredicted RBP8.16□□□□□ -1.1
NECAP1-227ENST00000640648 OR1M1Q8NGA1 313 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 OR56A4Q8NGH8 313 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 NRG4Q8WWG1 115 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 TBATAQ96M53 351 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 FAM129BQ96TA1 746 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 OSMRQ99650 979 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 IL22Q9GZX6 179 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 SLC6A17Q9H1V8 727 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 H0Y858 1186 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 CYB561D2O14569 222 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 TYROBPO43914 113 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 RAB3BP20337 219 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 MMP8P22894 467 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 OPRL1P41146 370 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 MTHFRP42898 656 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 ZNF81P51508 661 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 TKTL1P51854 596 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 ARFIP1P53367 373 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 DUSP6Q16828 381 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 UGT3A2Q3SY77 523 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 PIGGQ5H8A4 983 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 HECTD3Q5T447 861 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 UBE2UQ5VVX9 321 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 PTRHD1Q6GMV3 140 aaKnown RBP8.16□□□□□ -1.1
NECAP1-227ENST00000640648 METTL7BQ6UX53 244 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 HSDL2Q6YN16 418 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 PEG10Q86TG7 708 aaKnown RBP8.16□□□□□ -1.1
NECAP1-227ENST00000640648 NDNFQ8TB73 568 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 HASPINQ8TF76 798 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 HDAC10Q969S8 669 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 C3orf49Q96BT1 292 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 LGALS12Q96DT0 336 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 TRNT1Q96Q11 434 aaKnown RBP8.16□□□□□ -1.1
NECAP1-227ENST00000640648 AIF1LQ9BQI0 150 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 COPS4Q9BT78 406 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 ZNF112Q9UJU3 913 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 PCDHB3Q9Y5E6 796 aa8.16□□□□□ -1.1
NECAP1-227ENST00000640648 TNPO3Q9Y5L0 923 aaKnown RBP8.16□□□□□ -1.1
NECAP1-227ENST00000640648 NID2Q14112 1375 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 KIAA0355O15063 1070 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 PGLSO95336 258 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 ZNF286BP0CG31 522 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 CHMP24386 653 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 MSX2P35548 267 aaPredicted RBP8.15□□□□□ -1.1
NECAP1-227ENST00000640648 PTPN5P54829 565 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 CDH13P55290 713 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 ERVK-21P61565 698 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 KHDRBS2Q5VWX1 349 aaKnown RBP8.15□□□□□ -1.1
NECAP1-227ENST00000640648 REP15Q6BDI9 236 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 MRNIPQ6NTE8 343 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 OTOP3Q7RTS5 596 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 DEFB106AQ8N104 65 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 NATD1Q8N6N6 113 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 UTP15Q8TED0 518 aaKnown RBP8.15□□□□□ -1.1
NECAP1-227ENST00000640648 SEPT5Q99719 369 aaPredicted RBP8.15□□□□□ -1.1
NECAP1-227ENST00000640648 ELAC1Q9H777 363 aaKnown RBP8.15□□□□□ -1.1
NECAP1-227ENST00000640648 NTN4Q9HB63 628 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 FBXO8Q9NRD0 319 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 PGAP2Q9UHJ9 254 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 SNCAIPQ9Y6H5 919 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 CLDN24A6NM45 220 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 SIGLEC16A6NMB1 481 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 LYPLA2O95372 231 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 SLC25A27O95847 323 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 CYP2B6P20813 491 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 HLA-DMAP28067 261 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 GK3PQ14409 553 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 CARTPTQ16568 116 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 FNBP1LQ5T0N5 605 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 ATAD3CQ5T2N8 411 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 LRIF1Q5T3J3 769 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 ZPBP2Q6X784 338 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 UNC5AQ6ZN44 842 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 WDR53Q7Z5U6 358 aaPredicted RBP8.15□□□□□ -1.1
NECAP1-227ENST00000640648 TNS4Q8IZW8 715 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 FAM46DQ8NEK8 389 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 ZFAND1Q8TCF1 268 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 SLC22A17Q8WUG5 538 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 KCTD7Q96MP8 289 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 ZNF641Q96N77 438 aaPredicted RBP8.15□□□□□ -1.1
NECAP1-227ENST00000640648 RPRD1AQ96P16 312 aaPredicted RBP8.15□□□□□ -1.1
NECAP1-227ENST00000640648 DPY30Q9C005 99 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 CRISPLD1Q9H336 500 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 WASH6PQ9NQA3 447 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 TAS2R3Q9NYW6 316 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 OAS3Q9Y6K5 1087 aaKnown RBP8.15□□□□□ -1.1
NECAP1-227ENST00000640648 CACNA1FO60840 1977 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 DISP2A7MBM2 1401 aa8.15□□□□□ -1.1
NECAP1-227ENST00000640648 MYH10P35580 1976 aa8.15□□□□□ -1.11
NECAP1-227ENST00000640648 UNCXA6NJT0 531 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms