RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 CCNB1IP1Q9NPC3 277 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 CAB39Q9Y376 341 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-223ENST00000640640 DPPA5A6NC42 116 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 MTX2O75431 263 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 SOD2P04179 222 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 THRBP10828 461 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 GJA5P36382 358 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 CCNHP51946 323 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-223ENST00000640640 ROR2Q01974 943 aaKnown RBP17.3■□□□□ 0.36
SCARB2-223ENST00000640640 USP39Q53GS9 565 aaKnown RBP17.3■□□□□ 0.36
SCARB2-223ENST00000640640 CDC73Q6P1J9 531 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 TP53INP2Q8IXH6 220 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 KBTBD2Q8IY47 623 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 ARL10Q8N8L6 244 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 IMP4Q96G21 291 aaKnown RBP17.3■□□□□ 0.36
SCARB2-223ENST00000640640 RBM4BQ9BQ04 359 aaKnown RBP17.3■□□□□ 0.36
SCARB2-223ENST00000640640 RBM4Q9BWF3 364 aaKnown RBP17.3■□□□□ 0.36
SCARB2-223ENST00000640640 EBF3Q9H4W6 596 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 EBF2Q9HAK2 575 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 C3orf14Q9HBI5 128 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 EFCAB10A6NFE3 127 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 FAM25AB3EWG3 89 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 FAM25CB3EWG5 89 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 FAM25GB3EWG6 89 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 STX16-NPEPL1H3BU86 382 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 KPNA4O00629 521 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-223ENST00000640640 PCCBP05166 539 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 SLC10A3P09131 477 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 CCNA2P20248 432 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 FEN1P39748 380 aaKnown RBP17.3■□□□□ 0.36
SCARB2-223ENST00000640640 RFTN2Q52LD8 501 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-223ENST00000640640 RPS27LQ71UM5 84 aaKnown RBP17.3■□□□□ 0.36
SCARB2-223ENST00000640640 ZBTB46Q86UZ6 589 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 C1orf21Q9H246 121 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 SUCOQ9UBS9 1254 aaKnown RBP17.3■□□□□ 0.36
SCARB2-223ENST00000640640 ADAM30Q9UKF2 790 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 LAMA4Q16363 1823 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 C4AP0C0L4 1744 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 GSTM5P46439 218 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 MOGSQ13724 837 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 TMEM214Q6NUQ4 689 aaKnown RBP17.29■□□□□ 0.36
SCARB2-223ENST00000640640 C19orf18Q8NEA5 215 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 KIAA1191Q96A73 305 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 IGSF21Q96ID5 467 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 PSKH2Q96QS6 385 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 LRRC3Q9BY71 257 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 ERGIC3Q9Y282 383 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 ALOX12P18054 663 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 GUCA1AP43080 201 aaPredicted RBP17.29■□□□□ 0.36
SCARB2-223ENST00000640640 GALNT5Q7Z7M9 940 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 NPWQ8N729 165 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 OR9I1Q8NGQ6 314 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 DENND1AQ8TEH3 1009 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 ASB9Q96DX5 294 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 TEFMQ96QE5 360 aaKnown RBP17.29■□□□□ 0.36
SCARB2-223ENST00000640640 SLC39A3Q9BRY0 314 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 CHID1Q9BWS9 393 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 PDP1Q9P0J1 537 aaPredicted RBP17.29■□□□□ 0.36
SCARB2-223ENST00000640640 SEC14L3Q9UDX4 400 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 TJP1Q07157 1748 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 HAS3O00219 553 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 WNT9AO14904 365 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 GJB5O95377 273 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 EFNA1P20827 205 aaPredicted RBP17.29■□□□□ 0.36
SCARB2-223ENST00000640640 IGFBP5P24593 272 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 MAPK12P53778 367 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 SRSF11Q05519 484 aaKnown RBP17.29■□□□□ 0.36
SCARB2-223ENST00000640640 TPRG1Q6ZUI0 275 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 CYP2U1Q7Z449 544 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 THAP5Q7Z6K1 395 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 COQ10BQ9H8M1 238 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 DMTF1Q9Y222 760 aa17.29■□□□□ 0.36
SCARB2-223ENST00000640640 PI15O43692 258 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 MAFKO60675 156 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 ARSIQ5FYB1 569 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 C17orf99Q6UX52 265 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 GALNT13Q8IUC8 556 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 SRFBP1Q8NEF9 429 aaKnown RBP17.28■□□□□ 0.36
SCARB2-223ENST00000640640 WFIKKN2Q8TEU8 576 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 IGSF8Q969P0 613 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 MRGPRX2Q96LB1 330 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 OR2AG1Q9H205 316 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 EPB41L1Q9H4G0 881 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 TDP1Q9NUW8 608 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 ANKRD36CQ5JPF3 1778 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 MAGEB17A8MXT2 336 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 BHMG1C9JSJ3 638 aaPredicted RBP17.28■□□□□ 0.36
SCARB2-223ENST00000640640 INPPL1O15357 1258 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 GTF2E2P29084 291 aaKnown RBP17.28■□□□□ 0.36
SCARB2-223ENST00000640640 PNLIPRP1P54315 467 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 CYP4F3Q08477 520 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 LAPTM5Q13571 262 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 PDZK1Q5T2W1 519 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 TXNDC5Q8NBS9 432 aaKnown RBP17.28■□□□□ 0.36
SCARB2-223ENST00000640640 CLIP3Q96DZ5 547 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 ZNF514Q96K75 400 aaPredicted RBP17.28■□□□□ 0.36
SCARB2-223ENST00000640640 NSMCE3Q96MG7 304 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 ZNF778Q96MU6 729 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 DERL2Q9GZP9 239 aa17.28■□□□□ 0.36
SCARB2-223ENST00000640640 PPM1HQ9ULR3 514 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms