RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 EIF4E1BA6NMX2 242 aaKnown RBP10.86□□□□□ -0.67
SCN1B-208ENST00000640135 COCHO43405 550 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 VEGFDO43915 354 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 CST1P01037 141 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 NRG3P56975 720 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 SP140Q13342 867 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 TCEAL5Q5H9L2 206 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 LYSMD3Q7Z3D4 306 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 KIAA2013Q8IYS2 634 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 HM13Q8TCT9 377 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 SLC9A6Q92581 669 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 DNASE1L2Q92874 299 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 CCNB1IP1Q9NPC3 277 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 PNPOQ9NVS9 261 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 SCN11AQ9UI33 1791 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 PEX12O00623 359 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 TMCC2O75069 709 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 MED26O95402 600 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 CYP11A1P05108 521 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 IL12BP29460 328 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 ACVRL1P37023 503 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 SLC1A2P43004 574 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 GSTM4Q03013 218 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 SLC13A2Q13183 592 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 ARL13AQ5H913 290 aaPredicted RBP10.86□□□□□ -0.67
SCN1B-208ENST00000640135 PRAMEF14Q5SWL7 426 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 SH3PXD2AQ5TCZ1 1133 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 PRAMEF13Q5VWM6 474 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 ANO7Q6IWH7 933 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 TTC27Q6P3X3 843 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 AAGABQ6PD74 315 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 SPESP1Q6UW49 350 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 CACNG4Q9UBN1 327 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 ERVK-11Q9UQG0 969 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 ERGIC3Q9Y282 383 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 TELO2Q9Y4R8 837 aa10.86□□□□□ -0.67
SCN1B-208ENST00000640135 ATXN2Q99700 1313 aaKnown RBP10.86□□□□□ -0.67
SCN1B-208ENST00000640135 FFAR2O15552 330 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 OAS1P00973 400 aaKnown RBP10.85□□□□□ -0.67
SCN1B-208ENST00000640135 CAPN1P07384 714 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 MPIP34949 423 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 GSCP56915 257 aaPredicted RBP10.85□□□□□ -0.67
SCN1B-208ENST00000640135 ELAVL3Q14576 367 aaKnown RBP10.85□□□□□ -0.67
SCN1B-208ENST00000640135 ZNF805Q5CZA5 627 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 SIRPB2Q5JXA9 342 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 ZNF852Q6ZMS4 543 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 DEF8Q6ZN54 512 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 LRRC74BQ6ZQY2 392 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 FOXJ1Q92949 421 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 MS4A4AQ96JQ5 239 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 MARK4Q96L34 752 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 NDC1Q9BTX1 674 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 GTPBP2Q9BX10 602 aaKnown RBP10.85□□□□□ -0.67
SCN1B-208ENST00000640135 STRADBQ9C0K7 418 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 MRM3Q9HC36 420 aaKnown RBP10.85□□□□□ -0.67
SCN1B-208ENST00000640135 SLC17A7Q9P2U7 560 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 C19orf25Q9UFG5 118 aaPredicted RBP10.85□□□□□ -0.67
SCN1B-208ENST00000640135 IKZF3Q9UKT9 509 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 PCDHGA2Q9Y5H1 932 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 ARL5AQ9Y689 179 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 GLI3P10071 1580 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 B4DGG1 531 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 CNMDO75829 334 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 TOP3BO95985 862 aaKnown RBP10.85□□□□□ -0.67
SCN1B-208ENST00000640135 PRDX6P30041 224 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 CCKBRP32239 447 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 MLLT3P42568 568 aaPredicted RBP10.85□□□□□ -0.67
SCN1B-208ENST00000640135 PTGIRP43119 386 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 GATMP50440 423 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 RGS8P57771 180 aaPredicted RBP10.85□□□□□ -0.67
SCN1B-208ENST00000640135 CHRNA6Q15825 494 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 AMZ1Q400G9 498 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 EIPR1Q53HC9 387 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 MTX3Q5HYI7 312 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 SLC51AQ86UW1 340 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 RANBP3LQ86VV4 465 aaPredicted RBP10.85□□□□□ -0.67
SCN1B-208ENST00000640135 ZNF282Q9UDV7 671 aaPredicted RBP10.85□□□□□ -0.67
SCN1B-208ENST00000640135 PPIEQ9UNP9 301 aaKnown RBP10.85□□□□□ -0.67
SCN1B-208ENST00000640135 RGPD5Q99666 1765 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 ZNF840PA6NDX5 716 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 HEPACAM2A8MVW5 462 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 XKRYO14609 159 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 ATP6V1G2O95670 118 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 KCNA5P22460 613 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 HRH2P25021 359 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 MPSTP25325 297 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 PIK3CBP42338 1070 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 CLCNKAP51800 687 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 SLC7A2P52569 658 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 SLC25A3Q00325 362 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 GRM2Q14416 872 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 DGKKQ5KSL6 1271 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 EMC10Q5UCC4 262 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 FAM129CQ86XR2 697 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 FBXW8Q8N3Y1 598 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 FSTL5Q8N475 847 aaPredicted RBP10.85□□□□□ -0.67
SCN1B-208ENST00000640135 DDHD1Q8NEL9 900 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 TFGQ92734 400 aaPredicted RBP10.85□□□□□ -0.67
SCN1B-208ENST00000640135 SLC38A4Q969I6 547 aa10.85□□□□□ -0.67
SCN1B-208ENST00000640135 RGMAQ96B86 450 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms