RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	LRRC4C	Q9HCJ2	640 aa		14.31	□□□□□ -0.12
TARDBP-231	ENST00000639599	CCDC66	A2RUB6	948 aa		14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	TMEM150C	B9EJG8	249 aa		14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	GP1BB	P13224	206 aa		14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	PSMB4	P28070	264 aa		14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	KPNA2	P52292	529 aa	Known RBP	14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	OTUD4	Q01804	1114 aa	Known RBP	14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	CHAF1B	Q13112	559 aa		14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	ZRANB3	Q5FWF4	1079 aa		14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	CERS6	Q6ZMG9	384 aa		14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	TAS2R42	Q7RTR8	314 aa		14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	SNX20	Q7Z614	316 aa		14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	SPDYE1	Q8NFV5	336 aa	Predicted RBP	14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	MIB2	Q96AX9	1013 aa		14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	CALR3	Q96L12	384 aa	Known RBP	14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	LINC00615	Q96LM1	132 aa	Predicted RBP	14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	TBL1Y	Q9BQ87	522 aa		14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	TRIM5	Q9C035	493 aa		14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	ING2	Q9H160	280 aa		14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	LATS2	Q9NRM7	1088 aa		14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	C1GALT1	Q9NS00	363 aa		14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	FEZ2	Q9UHY8	353 aa	Predicted RBP	14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	SERTAD3	Q9UJW9	196 aa		14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	ZNF451	Q9Y4E5	1061 aa		14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	PCDHA13	Q9Y5I0	950 aa		14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	ZFC3H1	O60293	1989 aa	Known RBP	14.3	□□□□□ -0.12
TARDBP-231	ENST00000639599	MYO18B	Q8IUG5	2567 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	GOLGA6L9	A6NEM1	432 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	SLC9B1P1	A6NJY1	282 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	C2orf74	A8MZ97	194 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	MEN1	O00255	615 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	AGFG2	O95081	481 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	RBP3	P10745	1247 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	ATP1B2	P14415	290 aa	Predicted RBP	14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	AGXT	P21549	392 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	MARCKSL1	P49006	195 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	PRLHR	P49683	370 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	RRAD	P55042	308 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	SRSF1	Q07955	248 aa	Known RBP eCLIP	14.29	□□□□□ -0.12	3e-8	■■□□□ 11.4
TARDBP-231	ENST00000639599	ANKRD20A2	Q5SQ80	823 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	FHL5	Q5TD97	284 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	ANKRD20A1	Q5TYW2	823 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	ANKRD20A3	Q5VUR7	823 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	SARM1	Q6SZW1	724 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	ARHGEF18	Q6ZSZ5	1173 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	CCDC170	Q8IYT3	715 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	GPR135	Q8IZ08	494 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	NXPE1	Q8N323	547 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	ENDOV	Q8N8Q3	282 aa	Known RBP	14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	OR13C4	Q8NGS5	318 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	ACTL9	Q8TC94	416 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	CPT1C	Q8TCG5	803 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	NAT14	Q8WUY8	206 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	ZNF501	Q96CX3	271 aa	Predicted RBP	14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	RMDN2	Q96LZ7	410 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	RUFY1	Q96T51	708 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	CHST8	Q9H2A9	424 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	C10orf88	Q9H8K7	445 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	ACTR5	Q9H9F9	607 aa	Predicted RBP	14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	IRAK4	Q9NWZ3	460 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	BTRC	Q9Y297	605 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	PADI2	Q9Y2J8	665 aa		14.29	□□□□□ -0.12
TARDBP-231	ENST00000639599	C17orf113	A0A1B0GUU1	675 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	CYSRT1	A8MQ03	144 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599		E7EQ34	232 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599		K7EM74	188 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	GAPDHS	O14556	408 aa	Predicted RBP	14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	DDX3Y	O15523	660 aa	Known RBP	14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	KDM1A	O60341	852 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	DPM1	O60762	260 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	TJP3	O95049	919 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	HBQ1	P09105	142 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	MC4R	P32245	332 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	RWDD2B	P57060	319 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	GPS2	Q13227	327 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	GPR33	Q49SQ1	333 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	IZUMO3	Q5VZ72	239 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	CPZ	Q66K79	652 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	FBXO38	Q6PIJ6	1188 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	RAB43	Q86YS6	212 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	KRT35	Q92764	455 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	SPATA13	Q96N96	652 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	LRFN5	Q96NI6	719 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	C17orf62	Q9BQA9	187 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	HGH1	Q9BTY7	390 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	TRIM55	Q9BYV6	548 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	SLC29A3	Q9BZD2	475 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	OSBPL8	Q9BZF1	889 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	FAM96A	Q9H5X1	160 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	MVB12B	Q9H7P6	319 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	COG4	Q9H9E3	785 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	SLAMF7	Q9NQ25	335 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	ZDHHC3	Q9NYG2	299 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	GPN3	Q9UHW5	284 aa	Predicted RBP	14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	POMT2	Q9UKY4	750 aa		14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599	PCDHGA9	Q9Y5G4	932 aa	Known RBP	14.28	□□□□□ -0.12
TARDBP-231	ENST00000639599		F8W8V4	182 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	QSOX1	O00391	747 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	PJA2	O43164	708 aa		14.27	□□□□□ -0.13
TARDBP-231	ENST00000639599	TMEM63A	O94886	807 aa		14.27	□□□□□ -0.13

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