RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 IGLV3-16A0A075B6K0 115 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 OR56A5P0C7T3 313 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 CHN2P52757 468 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 POLR2LP62875 67 aaKnown RBP21.1■□□□□ 0.97
CLN6-224ENST00000638076 NTHL1P78549 312 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 ZDHHC20Q5W0Z9 365 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 CYP20A1Q6UW02 462 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 DET1Q7L5Y6 550 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 NECAB2Q7Z6G3 386 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 AMIGO2Q86SJ2 522 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 FAM110BQ8TC76 370 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 PPWD1Q96BP3 646 aaKnown RBP21.1■□□□□ 0.97
CLN6-224ENST00000638076 UHRF1Q96T88 793 aaPredicted RBP21.1■□□□□ 0.97
CLN6-224ENST00000638076 TRIM15Q9C019 465 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 ALG2Q9H553 416 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 MBD1Q9UIS9 605 aaPredicted RBP21.1■□□□□ 0.97
CLN6-224ENST00000638076 HCFC2Q9Y5Z7 792 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 C15orf38-AP3S2A0A0A6YYH1 394 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 AQP12BA6NM10 295 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 MAP3K13O43283 966 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 TIPRLO75663 272 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 EPB42P16452 691 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 RECQLP46063 649 aaPredicted RBP21.1■□□□□ 0.97
CLN6-224ENST00000638076 RPIAP49247 311 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 CDKL1Q00532 357 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 GRM2Q14416 872 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 ZNF77Q15935 545 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 MTX3Q5HYI7 312 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 HMBOX1Q6NT76 420 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 ARPINQ7Z6K5 226 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 IFNEQ86WN2 208 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 AQP12AQ8IXF9 295 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 KIAA2013Q8IYS2 634 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 YIPF3Q9GZM5 350 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 ACTL8Q9H568 366 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 FARSBQ9NSD9 589 aaKnown RBP21.1■□□□□ 0.97
CLN6-224ENST00000638076 ACTR3BQ9P1U1 418 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 RNF11Q9Y3C5 154 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 CCL27Q9Y4X3 112 aa21.1■□□□□ 0.97
CLN6-224ENST00000638076 PLXNB3Q9ULL4 1909 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 A0A1W2PQ67 120 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 ANXA5P08758 320 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 MSH3P20585 1137 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 BMPR1AP36894 532 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 HSPA13P48723 471 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 HSPA14Q0VDF9 509 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 NRF1Q16656 503 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 SPATS1Q496A3 300 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 C6orf52Q5T4I8 152 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 IRAK1BP1Q5VVH5 260 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 LCN8Q6JVE9 175 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 SLC2A7Q6PXP3 512 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 CYB5D2Q8WUJ1 264 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 SORCS1Q8WY21 1168 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 PPP3R2Q96LZ3 170 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 SPATA16Q9BXB7 569 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 COQ10BQ9H8M1 238 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 INTS7Q9NVH2 962 aaKnown RBP21.09■□□□□ 0.97
CLN6-224ENST00000638076 ARMC1Q9NVT9 282 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 UBAP1Q9NZ09 502 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 KLHL42Q9P2K6 505 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 TBC1D14Q9P2M4 693 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 KLQ9UEF7 1012 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 ERVW-1Q9UQF0 538 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 LZTS1Q9Y250 596 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 WNT6Q9Y6F9 365 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 WASH3PC4AMC7 463 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 ARPC2O15144 300 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 STK16O75716 305 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 GSK3BP49841 420 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 DMC1Q14565 340 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 FOXB2Q5VYV0 432 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 METTL2BQ6P1Q9 378 aaKnown RBP21.09■□□□□ 0.97
CLN6-224ENST00000638076 ST13P4Q8IZP2 240 aaPredicted RBP21.09■□□□□ 0.97
CLN6-224ENST00000638076 PIP4K2CQ8TBX8 421 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 ZSWIM3Q96MP5 696 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 TMEM74Q96NL1 305 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 NTMT1Q9BV86 223 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 CCM2LQ9NUG4 571 aaPredicted RBP21.09■□□□□ 0.97
CLN6-224ENST00000638076 ARL15Q9NXU5 204 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 PKD2L2Q9NZM6 624 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 AURKCQ9UQB9 309 aa21.09■□□□□ 0.97
CLN6-224ENST00000638076 LOC730098B7Z3J9 87 aa21.08■□□□□ 0.97
CLN6-224ENST00000638076 RGS14O43566 566 aa21.08■□□□□ 0.97
CLN6-224ENST00000638076 AKAP10O43572 662 aa21.08■□□□□ 0.97
CLN6-224ENST00000638076 RSL1D1O76021 490 aaKnown RBP21.08■□□□□ 0.97
CLN6-224ENST00000638076 EBLN1P0CF75 366 aa21.08■□□□□ 0.97
CLN6-224ENST00000638076 SLC2A4P14672 509 aa21.08■□□□□ 0.97
CLN6-224ENST00000638076 POLR2EP19388 210 aaKnown RBP21.08■□□□□ 0.97
CLN6-224ENST00000638076 AOAHP28039 575 aa21.08■□□□□ 0.97
CLN6-224ENST00000638076 RPL38P63173 70 aaKnown RBP21.08■□□□□ 0.97
CLN6-224ENST00000638076 LIPEQ05469 1076 aa21.08■□□□□ 0.97
CLN6-224ENST00000638076 AAK1Q2M2I8 961 aa21.08■□□□□ 0.97
CLN6-224ENST00000638076 NANOGP8Q6NSW7 305 aa21.08■□□□□ 0.97
CLN6-224ENST00000638076 ZNF557Q8N988 423 aaPredicted RBP21.08■□□□□ 0.97
CLN6-224ENST00000638076 NUDT8Q8WV74 236 aa21.08■□□□□ 0.97
CLN6-224ENST00000638076 SKA2Q8WVK7 121 aaPredicted RBP21.08■□□□□ 0.97
CLN6-224ENST00000638076 CNBD2Q96M20 576 aa21.08■□□□□ 0.97
CLN6-224ENST00000638076 RAD9AQ99638 391 aa21.08■□□□□ 0.97
CLN6-224ENST00000638076 KCTD14Q9BQ13 255 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms