RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 CHRNA6Q15825 494 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 ADRM1Q16186 407 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 CDKN3Q16667 212 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 ESAMQ96AP7 390 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 CNDP1Q96KN2 507 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 KLHL32Q96NJ5 620 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 NEURL2Q9BR09 285 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 RSL24D1Q9UHA3 163 aaKnown RBP11.34□□□□□ -0.59
CLN6-217ENST00000636964 SUPT3HB4E1H0 165 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 H7C0S8 307 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 RFXAPO00287 272 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 BTN3A1O00481 513 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 UBFD1O14562 309 aaKnown RBP11.34□□□□□ -0.59
CLN6-217ENST00000636964 ZNF197O14709 1029 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 NPHS1O60500 1241 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 SOCS5O75159 536 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 VPS26AO75436 327 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 TSPAN9O75954 239 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 MTHFD2P13995 350 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 GFAPP14136 432 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 POLR2EP19388 210 aaKnown RBP11.34□□□□□ -0.59
CLN6-217ENST00000636964 RPL10P27635 214 aaKnown RBP11.34□□□□□ -0.59
CLN6-217ENST00000636964 SLC26A3P40879 764 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 MAPK8P45983 427 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 CSNK1DP48730 415 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 RAD51Q06609 339 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 C16orf72Q14CZ0 275 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 DHCR24Q15392 516 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 LRRC66Q68CR7 880 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 CLEC6AQ6EIG7 209 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 C12orf40Q86WS4 652 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 FBXW8Q8N3Y1 598 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 GPR26Q8NDV2 337 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 JADE3Q92613 823 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 NSUN5Q96P11 429 aaKnown RBP11.34□□□□□ -0.59
CLN6-217ENST00000636964 STN1Q9H668 368 aaKnown RBP11.34□□□□□ -0.59
CLN6-217ENST00000636964 SYTL2Q9HCH5 934 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 DUS2Q9NX74 493 aaKnown RBP11.34□□□□□ -0.59
CLN6-217ENST00000636964 CD84Q9UIB8 345 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 TRMT6Q9UJA5 497 aaKnown RBP11.34□□□□□ -0.59
CLN6-217ENST00000636964 RAB26Q9ULW5 256 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 RNF112Q9ULX5 631 aa11.34□□□□□ -0.59
CLN6-217ENST00000636964 IMPDH1P20839 514 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 SERPINB5P36952 375 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 ALDH3B2P48448 385 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 COPAP53621 1224 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 BCL2A1Q16548 175 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 UNC50Q53HI1 259 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 ZNF678Q5SXM1 525 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 CUZD1Q86UP6 607 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 OR2A12Q8NGT7 310 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 CCDC126Q96EE4 140 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 GSTO2Q9H4Y5 243 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 EBF1Q9UH73 591 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 ERVW-1Q9UQF0 538 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 NOX1Q9Y5S8 564 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 PRSS21Q9Y6M0 314 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 TNFRSF10AO00220 468 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 PFDN6O15212 129 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 POP4O95707 220 aaKnown RBP11.33□□□□□ -0.6
CLN6-217ENST00000636964 HOXB8P17481 243 aaPredicted RBP11.33□□□□□ -0.6
CLN6-217ENST00000636964 LHCGRP22888 699 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 PTGER3P43115 390 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 CDK9P50750 372 aaKnown RBP11.33□□□□□ -0.6
CLN6-217ENST00000636964 NR1H2P55055 460 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 NFATC2Q13469 925 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 TBCCQ15814 346 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 PTRHD1Q6GMV3 140 aaKnown RBP11.33□□□□□ -0.6
CLN6-217ENST00000636964 METTL3Q86U44 580 aaKnown RBP11.33□□□□□ -0.6
CLN6-217ENST00000636964 SLC22A9Q8IVM8 553 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 LEMD2Q8NC56 503 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 CD200R1Q8TD46 325 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 OSCP1Q8WVF1 389 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 LINGO1Q96FE5 620 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 ATOH8Q96SQ7 321 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 PSMD13Q9UNM6 376 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 FADS3Q9Y5Q0 445 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 A0A0C4DFX4 3053 aa11.33□□□□□ -0.6
CLN6-217ENST00000636964 GLYATL1P3A0A0U1RQE8 302 aa11.32□□□□□ -0.6
CLN6-217ENST00000636964 ARHGAP10A1A4S6 786 aa11.32□□□□□ -0.6
CLN6-217ENST00000636964 FUOMA2VDF0 154 aa11.32□□□□□ -0.6
CLN6-217ENST00000636964 TRIM16O95361 564 aa11.32□□□□□ -0.6
CLN6-217ENST00000636964 CYP17A1P05093 508 aa11.32□□□□□ -0.6
CLN6-217ENST00000636964 PTSQ03393 145 aa11.32□□□□□ -0.6
CLN6-217ENST00000636964 AARS2Q5JTZ9 985 aaKnown RBP11.32□□□□□ -0.6
CLN6-217ENST00000636964 VN1R2Q8NFZ6 395 aa11.32□□□□□ -0.6
CLN6-217ENST00000636964 SCRN2Q96FV2 425 aa11.32□□□□□ -0.6
CLN6-217ENST00000636964 BRD9Q9H8M2 597 aa11.32□□□□□ -0.6
CLN6-217ENST00000636964 POPDC3Q9HBV1 291 aa11.32□□□□□ -0.6
CLN6-217ENST00000636964 SELENONQ9NZV5 590 aa11.32□□□□□ -0.6
CLN6-217ENST00000636964 CRLS1Q9UJA2 301 aa11.32□□□□□ -0.6
CLN6-217ENST00000636964 VPS9D1Q9Y2B5 631 aa11.32□□□□□ -0.6
CLN6-217ENST00000636964 FAM32AQ9Y421 112 aaKnown RBP11.32□□□□□ -0.6
CLN6-217ENST00000636964 OAS3Q9Y6K5 1087 aaKnown RBP11.32□□□□□ -0.6
CLN6-217ENST00000636964 C7orf72A4D263 438 aa11.32□□□□□ -0.6
CLN6-217ENST00000636964 OTOL1A6NHN0 477 aaPredicted RBP11.32□□□□□ -0.6
CLN6-217ENST00000636964 NOTOA8MTQ0 251 aa11.32□□□□□ -0.6
CLN6-217ENST00000636964 PRMT5O14744 637 aaPredicted RBP11.32□□□□□ -0.6
CLN6-217ENST00000636964 ECI2O75521 394 aa11.32□□□□□ -0.6
CLN6-217ENST00000636964 FAM58BPP0C7Q3 252 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms