RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	THEM5	Q8N1Q8	247 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	PLD6	Q8N2A8	252 aa	Known RBP	10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	AMER2	Q8N7J2	671 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	TXNDC5	Q8NBS9	432 aa	Known RBP	10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	PJA1	Q8NG27	643 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	SPPL2B	Q8TCT7	592 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	AGR3	Q8TD06	166 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	CLEC4C	Q8WTT0	213 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	FBLIM1	Q8WUP2	373 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	NT5C3B	Q969T7	300 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	TSNARE1	Q96NA8	513 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	ACE2	Q9BYF1	805 aa	Predicted RBP	10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	DCSTAMP	Q9H295	470 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	ERVMER34-1	Q9H9K5	563 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	EIF2B3	Q9NR50	452 aa	Known RBP	10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	CHRAC1	Q9NRG0	131 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	ZNF358	Q9NW07	568 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	POLR3B	Q9NW08	1133 aa	Predicted RBP	10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	FAM118A	Q9NWS6	357 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	UCKL1	Q9NWZ5	548 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	EHD3	Q9NZN3	535 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	KLHL21	Q9UJP4	597 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306	TPRKB	Q9Y3C4	175 aa		10.61	□□□□□ -0.71
CHD2-223	ENST00000636306		A8MX80	341 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306		H3BUI4	141 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	LTF	P02788	710 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	CYP11A1	P05108	521 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	ASGR1	P07306	291 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	ZNF30	P17039	623 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	CHRM3	P20309	590 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	DNAJB2	P25686	324 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	GTF2E2	P29084	291 aa	Known RBP	10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	SCNN1G	P51170	649 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	DAOA	P59103	153 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	NCS1	P62166	190 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	OLR1	P78380	273 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	CD47	Q08722	323 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	SCAP	Q12770	1279 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	FAP	Q12884	760 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	TUSC3	Q13454	348 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	MFSD13A	Q14CX5	517 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	CA9	Q16790	459 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	CYP51A1	Q16850	503 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	IMPG1	Q17R60	797 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	FAM26D	Q5JW98	314 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	PROSER1	Q86XN7	944 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	SYTL1	Q8IYJ3	562 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	FNDC5	Q8NAU1	212 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	RNF139	Q8WU17	664 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	DEDD2	Q8WXF8	326 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	SGCD	Q92629	289 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	RPL3L	Q92901	407 aa	Known RBP	10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	CIDEC	Q96AQ7	238 aa	Predicted RBP	10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	PGAP3	Q96FM1	320 aa	Predicted RBP	10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	PPP1R36	Q96LQ0	422 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	ACBD6	Q9BR61	282 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	ROGDI	Q9GZN7	287 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	MEAF6	Q9HAF1	191 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306		A0A0A0MRY4	1105 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306		A0A0U1RQF3	1178 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	WDR27	A2RRH5	827 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	EFCAB9	A8MZ26	197 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306		M0QYT0	321 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	MEN1	O00255	615 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	EEF2K	O00418	725 aa	Known RBP	10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	AXIN1	O15169	862 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	HCRT	O43612	131 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	TLL1	O43897	1013 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	CPNE3	O75131	537 aa	Known RBP	10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	FTH1	P02794	183 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	HMGN1	P05114	100 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	JUND	P17535	347 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	HLA-DMA	P28067	261 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	OXTR	P30559	389 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	FMO4	P31512	558 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	MAGEA11	P43364	429 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	GZMK	P49863	264 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	NRL	P54845	237 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	CXCR4	P61073	352 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	NOG	Q13253	232 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	NFE2L1	Q14494	772 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	MEP1A	Q16819	746 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	ZIK1	Q3SY52	487 aa	Predicted RBP	10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	INTS6L	Q5JSJ4	861 aa	Known RBP	10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	NCBP2-AS2	Q69YL0	99 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	TBPL2	Q6SJ96	375 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	BNIPL	Q7Z465	357 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	AMIGO1	Q86WK6	493 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	FAM131B	Q86XD5	332 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	RIMKLA	Q8IXN7	391 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	CLEC4F	Q8N1N0	589 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	DTX3	Q8N9I9	347 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	TP53I13	Q8NBR0	393 aa	Predicted RBP	10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	KLHDC9	Q8NEP7	349 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	HTR3C	Q8WXA8	447 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	SPATA13	Q96N96	652 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	SLC30A3	Q99726	388 aa		10.6	□□□□□ -0.71
CHD2-223	ENST00000636306	ULBP1	Q9BZM6	244 aa		10.6	□□□□□ -0.71

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