RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 GPR21Q99679 349 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 MRPL46Q9H2W6 279 aaKnown RBP12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 C6orf106Q9H6K1 298 aaPredicted RBP12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 IL17CQ9P0M4 197 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 G3BP2Q9UN86 482 aaKnown RBP12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 GBF1Q92538 1859 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 GPR179Q6PRD1 2367 aa12.26□□□□□ -0.45
SYNGAP1-207ENST00000628646 KPNA5O15131 536 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 CATP04040 527 aaKnown RBP12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 ANXA6P08133 673 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 THRAP10827 490 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 AMD1P17707 334 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 ADPRHP54922 357 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 C1orf210Q8IVY1 113 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 TCF12Q99081 682 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 MYCBPQ99417 103 aaPredicted RBP12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 PCDHB1Q9Y5F3 818 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 DOCK8Q8NF50 2099 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 H0Y3Z8 333 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 ZBTB14O43829 449 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 SERPIND1P05546 499 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 CCDC166P0CW27 439 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 ADRA1AP35348 466 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 TMEM115Q12893 351 aaPredicted RBP12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 MSLNQ13421 630 aaPredicted RBP12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 TAF11Q15544 211 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 USP30Q70CQ3 517 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 OOSP2Q86WS3 158 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 NXPE1Q8N323 547 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 GPR26Q8NDV2 337 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 MCOLN3Q8TDD5 553 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 LMX1AQ8TE12 382 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 NAF1Q96HR8 494 aaKnown RBP12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 HDAC8Q9BY41 377 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 SLC7A8Q9UHI5 535 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 CNOT1A5YKK6 2376 aaKnown RBP12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 PSMG1O95456 288 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 PEX11BO96011 259 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 TNFP01375 233 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 ATXN1LP0C7T5 689 aaKnown RBP12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 ARCN1P48444 511 aaKnown RBP12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 CCINQ13939 588 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 PRRT3Q5FWE3 981 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 VWA5B1Q5TIE3 1220 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 KIAA0895LQ68EN5 471 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 C16orf89Q6UX73 402 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 RNF111Q6ZNA4 994 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 LRRTM4Q86VH4 590 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 CNTN4Q8IWV2 1026 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 KBTBD2Q8IY47 623 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 MAPK15Q8TD08 544 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 TSACCQ96A04 125 aaPredicted RBP12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 WDR92Q96MX6 357 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 IL26Q9NPH9 171 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 CIDEBQ9UHD4 219 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 LAMA3Q16787 3333 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 PRAMEF26H0Y7S4 382 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 FFAR2O15552 330 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 HTRA2O43464 458 aaPredicted RBP12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 POP7O75817 140 aaKnown RBP12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 PRSS56P0CW18 603 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 RPL10P27635 214 aaKnown RBP12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 STC1P52823 247 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 SESN3P58005 492 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 IHHQ14623 411 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 TRAM1L1Q8N609 369 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 BEND7Q8N7W2 519 aaPredicted RBP12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 SNX31Q8N9S9 440 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 MOCOSQ96EN8 888 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 FERD3LQ96RJ6 166 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 NMRK1Q9NWW6 199 aa12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 STX18Q9P2W9 335 aaKnown RBP12.25□□□□□ -0.45
SYNGAP1-207ENST00000628646 SPAG17Q6Q759 2223 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 MIA3Q5JRA6 1907 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 GPR39O43194 453 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 GRID2O43424 1007 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 ADAM23O75077 832 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 NIPSNAP2O75323 286 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 CD160O95971 181 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 RPN2P04844 631 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 OGNP20774 298 aaKnown RBP12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 CYP2A7P20853 494 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 MMP12P39900 470 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 CSNK1EP49674 416 aaKnown RBP12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 HECTD2Q5U5R9 776 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 Q6ZSR6 202 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 AADATQ8N5Z0 425 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 MED8Q96G25 268 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 GPR78Q96P69 363 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 MRPL57Q9BQC6 102 aaKnown RBP12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 SLC7A5P2Q9GIP4 190 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 FZD4Q9ULV1 537 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 MTCL1Q9Y4B5 1905 aaKnown RBP12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 B4DGG1 531 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 SDC3O75056 442 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 PAPSS2O95340 614 aaPredicted RBP12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 VIPP01282 170 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 MMP2P08253 660 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 ATP6V1C1P21283 382 aa12.24□□□□□ -0.45
SYNGAP1-207ENST00000628646 PRKG2Q13237 762 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms