RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 FRG1Q14331 258 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 CRYMQ14894 314 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 ZNF658BQ4V348 819 aaPredicted RBP13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 ZNF470Q6ECI4 717 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 USP53Q70EK8 1073 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 OTOAQ7RTW8 1153 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 OOSP2Q86WS3 158 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 FBXO39Q8N4B4 442 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 ZNF592Q92610 1267 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 TRIM51Q9BSJ1 452 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 P2RY12Q9H244 342 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 OR52A5Q9H2C5 316 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 RDH14Q9HBH5 336 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 MARCH4Q9P2E8 410 aaPredicted RBP13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 KLHL42Q9P2K6 505 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 FAM8A1Q9UBU6 413 aa13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 ATXN7L1Q9ULK2 861 aaPredicted RBP13.68□□□□□ -0.22
SNRPA1-216ENST00000626000 COL27A1Q8IZC6 1860 aaPredicted RBP13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 IGHV5-10-1A0A0J9YXX1 117 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 SLC5A10A0PJK1 596 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 OR1I1O60431 355 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 ATP5DP30049 168 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 RPL21P46778 160 aaKnown RBP13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 EIF3BP55884 814 aaKnown RBP13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 RAB15P59190 212 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 DHX9Q08211 1270 aaKnown RBP13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 C2orf54Q08AI8 447 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 PRKAA1Q13131 559 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 TTLL9Q3SXZ7 439 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 BBS9Q3SYG4 887 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 C3orf38Q5JPI3 329 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 PLEKHS1Q5SXH7 462 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 ARMC6Q6NXE6 501 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 C8orf74Q6P047 294 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 TTC23LQ6PF05 361 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 UNC5DQ6UXZ4 953 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 GALNT7Q86SF2 657 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 KCNMB4Q86W47 210 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 SLC22A15Q8IZD6 547 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 PHC3Q8NDX5 983 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 MAGEC3Q8TD91 643 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 NCSTNQ92542 709 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 LPGAT1Q92604 370 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 TFGQ92734 400 aaPredicted RBP13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 RMDN2Q96LZ7 410 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 FOPNLQ96NB1 174 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 CNTNAP3BQ96NU0 1288 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 INSM2Q96T92 566 aaPredicted RBP13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 NUDT22Q9BRQ3 303 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 CNTNAP3Q9BZ76 1288 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 TRIT1Q9H3H1 467 aaKnown RBP13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 ZC3H7BQ9UGR2 993 aaKnown RBP13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 SLC24A2Q9UI40 661 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 CORO1CQ9ULV4 474 aaPredicted RBP13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 SATB2Q9UPW6 733 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 PCDHGA7Q9Y5G6 932 aa13.67□□□□□ -0.22
SNRPA1-216ENST00000626000 CTAGE15A4D2H0 777 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 E5RI56 91 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 E7ESA3 106 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 RAD51CO43502 376 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 SLCO2B1O94956 709 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 C9P02748 559 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 CTAGE8P0CG41 777 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 PKMP14618 531 aaKnown RBP13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 CD82P27701 267 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 CSF2RBP32927 897 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 SHMT2P34897 504 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 CLDN6P56747 220 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 CYP4F3Q08477 520 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 SEMA3AQ14563 771 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 TBC1D25Q3MII6 688 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 DUPD1Q68J44 220 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 LRRC8EQ6NSJ5 796 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 UGT3A1Q6NUS8 523 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 CES3Q6UWW8 571 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 B3GNT8Q7Z7M8 397 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 CTAGE6Q86UF2 777 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 PROSER1Q86XN7 944 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 KMT5CQ86Y97 462 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 CTAGE4Q8IX94 777 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 TBC1D21Q8IYX1 336 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 RAB42Q8N4Z0 105 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 SNIP1Q8TAD8 396 aaKnown RBP13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 UBXN4Q92575 508 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 KCNJ9Q92806 393 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 FGF11Q92914 225 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 CCDC74BQ96LY2 380 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 SLC46A1Q96NT5 459 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 FCRL3Q96P31 734 aaPredicted RBP13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 TEFMQ96QE5 360 aaKnown RBP13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 FERD3LQ96RJ6 166 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 ZPBPQ9BS86 351 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 RAB11FIP5Q9BXF6 653 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 TBC1D10AQ9BXI6 508 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 TRIM31Q9BZY9 425 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 TSPYL1Q9H0U9 437 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 TFB2MQ9H5Q4 396 aaKnown RBP13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 NSMCE4AQ9NXX6 385 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 ASF1AQ9Y294 204 aa13.66□□□□□ -0.22
SNRPA1-216ENST00000626000 SNX24Q9Y343 169 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms