RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 FAM20BO75063 409 aa10.93□□□□□ -0.66
VPS8-227ENST00000625842 GJA1P17302 382 aa10.93□□□□□ -0.66
VPS8-227ENST00000625842 DNAJA1P31689 397 aaKnown RBP10.93□□□□□ -0.66
VPS8-227ENST00000625842 ARG2P78540 354 aa10.93□□□□□ -0.66
VPS8-227ENST00000625842 ABATP80404 500 aa10.93□□□□□ -0.66
VPS8-227ENST00000625842 SEMA3AQ14563 771 aa10.93□□□□□ -0.66
VPS8-227ENST00000625842 DPY19L1Q2PZI1 675 aa10.93□□□□□ -0.66
VPS8-227ENST00000625842 PAQR7Q86WK9 346 aa10.93□□□□□ -0.66
VPS8-227ENST00000625842 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.93□□□□□ -0.66
VPS8-227ENST00000625842 TMCO6Q96DC7 493 aa10.93□□□□□ -0.66
VPS8-227ENST00000625842 NAA11Q9BSU3 229 aaPredicted RBP10.93□□□□□ -0.66
VPS8-227ENST00000625842 MRM3Q9HC36 420 aaKnown RBP10.93□□□□□ -0.66
VPS8-227ENST00000625842 HMG20AQ9NP66 347 aa10.93□□□□□ -0.66
VPS8-227ENST00000625842 COQ3Q9NZJ6 369 aa10.93□□□□□ -0.66
VPS8-227ENST00000625842 KCND3Q9UK17 655 aa10.93□□□□□ -0.66
VPS8-227ENST00000625842 ABCC6O95255 1503 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 LRIG2O94898 1065 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 AHSA1O95433 338 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 FHP07954 510 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 MTHFD1P11586 935 aaKnown RBP10.92□□□□□ -0.66
VPS8-227ENST00000625842 MYL9P24844 172 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 PPIDQ08752 370 aaKnown RBP10.92□□□□□ -0.66
VPS8-227ENST00000625842 SQLEQ14534 574 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 ZNF805Q5CZA5 627 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 CCNI2Q6ZMN8 369 aaPredicted RBP10.92□□□□□ -0.66
VPS8-227ENST00000625842 ZNF100Q8IYN0 542 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 LSMEM2Q8N112 164 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 SLC5A8Q8N695 610 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 C12orf76Q8N812 135 aaPredicted RBP10.92□□□□□ -0.66
VPS8-227ENST00000625842 FBXO30Q8TB52 745 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 CYB5D2Q8WUJ1 264 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 EMID1Q96A84 441 aaPredicted RBP10.92□□□□□ -0.66
VPS8-227ENST00000625842 EXOSC8Q96B26 276 aaKnown RBP10.92□□□□□ -0.66
VPS8-227ENST00000625842 CAMK1GQ96NX5 476 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 ASPNQ9BXN1 380 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 CHMP1AQ9HD42 196 aaPredicted RBP10.92□□□□□ -0.66
VPS8-227ENST00000625842 PAIP2BQ9ULR5 123 aaKnown RBP10.92□□□□□ -0.66
VPS8-227ENST00000625842 FTCDNL1E5RQL4 147 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 TRIM24O15164 1050 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 GSRP00390 522 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 CD247P20963 164 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 DCKP27707 260 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 ADSLP30566 484 aaPredicted RBP10.92□□□□□ -0.66
VPS8-227ENST00000625842 RAB14P61106 215 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 SLC10A6Q3KNW5 377 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 YTHDF3Q7Z739 585 aaKnown RBP10.92□□□□□ -0.66
VPS8-227ENST00000625842 IPCEF1Q8WWN9 437 aaPredicted RBP10.92□□□□□ -0.66
VPS8-227ENST00000625842 RAB9BQ9NP90 201 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 LYARQ9NX58 379 aaKnown RBP10.92□□□□□ -0.66
VPS8-227ENST00000625842 SORCS3Q9UPU3 1222 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 SNX13Q9Y5W8 968 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 SLC7A4O43246 635 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 SOCS5O75159 536 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 LYPLA1O75608 230 aaPredicted RBP10.92□□□□□ -0.66
VPS8-227ENST00000625842 LPLP06858 475 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 GP1BBP13224 206 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 ANPEPP15144 967 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 HNRNPA2B1P22626 353 aaKnown RBP10.92□□□□□ -0.66
VPS8-227ENST00000625842 PIK3CBP42338 1070 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 GALK2Q01415 458 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 TMEM44Q2T9K0 475 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 PITRM1Q5JRX3 1037 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 SPATA19Q7Z5L4 167 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 CRYBG2Q8N1P7 616 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 MMP20O60882 483 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 PIGNO95427 931 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 THEGLP0DJG4 465 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 ST3GAL1Q11201 340 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 CHIT1Q13231 466 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 CES3Q6UWW8 571 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 ZNF730Q6ZMV8 503 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 Q6ZVU0 165 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 SLC22A15Q8IZD6 547 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 OFCC1Q8IZS5 231 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 GBA3Q9H227 469 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 CDC42EP4Q9H3Q1 356 aaKnown RBP10.92□□□□□ -0.66
VPS8-227ENST00000625842 ANKZF1Q9H8Y5 726 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 LRTM1Q9HBL6 345 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 ARL8BQ9NVJ2 186 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 EIF3KQ9UBQ5 218 aaKnown RBP10.92□□□□□ -0.66
VPS8-227ENST00000625842 PCDHGB7Q9Y5F8 929 aa10.92□□□□□ -0.66
VPS8-227ENST00000625842 A0A1B0GTW7 788 aa10.91□□□□□ -0.66
VPS8-227ENST00000625842 OR2B3O76000 313 aa10.91□□□□□ -0.66
VPS8-227ENST00000625842 KLK7P49862 253 aa10.91□□□□□ -0.66
VPS8-227ENST00000625842 UBE2NP61088 152 aaKnown RBP10.91□□□□□ -0.66
VPS8-227ENST00000625842 PDK4Q16654 411 aa10.91□□□□□ -0.66
VPS8-227ENST00000625842 RFX4Q33E94 735 aa10.91□□□□□ -0.66
VPS8-227ENST00000625842 ZNF311Q5JNZ3 666 aa10.91□□□□□ -0.66
VPS8-227ENST00000625842 ZCCHC9Q8N567 271 aaKnown RBP10.91□□□□□ -0.66
VPS8-227ENST00000625842 MRPL38Q96DV4 380 aaKnown RBP10.91□□□□□ -0.66
VPS8-227ENST00000625842 DIABLOQ9NR28 239 aa10.91□□□□□ -0.66
VPS8-227ENST00000625842 KCPQ6ZWJ8 1503 aa10.91□□□□□ -0.66
VPS8-227ENST00000625842 PNMA8CA0A1B0GUJ8 204 aa10.91□□□□□ -0.66
VPS8-227ENST00000625842 PDPK1O15530 556 aa10.91□□□□□ -0.66
VPS8-227ENST00000625842 SNAI1O95863 264 aaPredicted RBP10.91□□□□□ -0.66
VPS8-227ENST00000625842 ENPP2Q13822 863 aa10.91□□□□□ -0.66
VPS8-227ENST00000625842 CBFBQ13951 182 aa10.91□□□□□ -0.66
VPS8-227ENST00000625842 ZBTB6Q15916 424 aa10.91□□□□□ -0.66
VPS8-227ENST00000625842 SLC41A1Q8IVJ1 513 aa10.91□□□□□ -0.66
VPS8-227ENST00000625842 PRR11Q96HE9 360 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms