RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 CLDN19Q8N6F1 224 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 TTC29Q8NA56 475 aaPredicted RBP15.91■□□□□ 0.14
GABRB3-215ENST00000622697 PTPN18Q99952 460 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 C1QTNF7Q9BXJ2 289 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 NUSAP1Q9BXS6 441 aaKnown RBP15.91■□□□□ 0.14
GABRB3-215ENST00000622697 C1orf21Q9H246 121 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 SSR3Q9UNL2 185 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 ZNF510Q9Y2H8 683 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 AP3D1O14617 1153 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 CBFA2T3O75081 653 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 SNAI1O95863 264 aaPredicted RBP15.91■□□□□ 0.14
GABRB3-215ENST00000622697 RABL3Q5HYI8 236 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 ZNF554Q86TJ5 538 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 TXNDC5Q8NBS9 432 aaKnown RBP15.91■□□□□ 0.14
GABRB3-215ENST00000622697 RAD51AP1Q96B01 352 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 C1GALT1C1Q96EU7 318 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 DNAJB4Q9UDY4 337 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 TLL2Q9Y6L7 1015 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 MATN2O00339 956 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 PDE9AO76083 593 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 HLA-DQA2P01906 255 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 AP1S1P61966 158 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 GCNT6Q5T4J0 391 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 CHSY3Q70JA7 882 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 PDSS2Q86YH6 399 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 TMEM199Q8N511 208 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 CCDC106Q9BWC9 280 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 LIN28AQ9H9Z2 209 aaKnown RBP15.91■□□□□ 0.14
GABRB3-215ENST00000622697 PTTG2Q9NZH5 202 aa15.91■□□□□ 0.14
GABRB3-215ENST00000622697 IFT80Q9P2H3 777 aaPredicted RBP15.91■□□□□ 0.14
GABRB3-215ENST00000622697 PIRO00625 290 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 UGT2B17O75795 530 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 CTSEP14091 401 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 LRRC3Q9BY71 257 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 ABCB9Q9NP78 766 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 LRRC42Q9Y546 428 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 MYOCOSA0A1B0GUC4 107 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 CCDC182A6NF36 153 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 EOMESO95936 686 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 RAP2AP10114 183 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 TRAP1Q12931 704 aaKnown RBP15.9■□□□□ 0.14
GABRB3-215ENST00000622697 HERC3Q15034 1050 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 GPR153Q6NV75 609 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 CYP2U1Q7Z449 544 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 GALNT15Q8N3T1 639 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 SPACA7Q96KW9 195 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 ZW10O43264 779 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 SMIM11AP58511 58 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 HSPB3Q12988 150 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 GNA13Q14344 377 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 PDE12Q6L8Q7 609 aaKnown RBP15.9■□□□□ 0.14
GABRB3-215ENST00000622697 BHLHB9Q6PI77 547 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 TMEM220Q6QAJ8 160 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 GPRIN1Q7Z2K8 1008 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 PARGQ86W56 976 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 CLIP4Q8N3C7 705 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 LEMD2Q8NC56 503 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 FUBP3Q96I24 572 aaKnown RBP eCLIP15.9■□□□□ 0.14
GABRB3-215ENST00000622697 SUSD3Q96L08 255 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 WDR12Q9GZL7 423 aaKnown RBP15.9■□□□□ 0.14
GABRB3-215ENST00000622697 C8orf4Q9NR00 106 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 GOLGA4Q13439 2230 aaKnown RBP15.9■□□□□ 0.14
GABRB3-215ENST00000622697 A0A088AWK7 358 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 CLIC3O95833 236 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 ENO2P09104 434 aaPredicted RBP15.9■□□□□ 0.14
GABRB3-215ENST00000622697 GJA1P17302 382 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 ZNF10P21506 573 aaPredicted RBP15.9■□□□□ 0.14
GABRB3-215ENST00000622697 RPL4P36578 427 aaKnown RBP15.9■□□□□ 0.14
GABRB3-215ENST00000622697 SULT2A1Q06520 285 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 HLA-DQA1Q5Y7H0 255 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 HDDC2Q7Z4H3 204 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 DENND1AQ8TEH3 1009 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 TIFAQ96CG3 184 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 PDE4DIPQ5VU43 2346 aa15.9■□□□□ 0.14
GABRB3-215ENST00000622697 E7ESA3 106 aa15.89■□□□□ 0.14
GABRB3-215ENST00000622697 OR10H2O60403 315 aa15.89■□□□□ 0.14
GABRB3-215ENST00000622697 GTF2E2P29084 291 aaKnown RBP15.89■□□□□ 0.14
GABRB3-215ENST00000622697 NFKB2Q00653 900 aa15.89■□□□□ 0.14
GABRB3-215ENST00000622697 ZNF792Q3KQV3 632 aa15.89■□□□□ 0.14
GABRB3-215ENST00000622697 ERICH5Q6P6B1 374 aa15.89■□□□□ 0.14
GABRB3-215ENST00000622697 COMMD2Q86X83 199 aa15.89■□□□□ 0.14
GABRB3-215ENST00000622697 PLD4Q96BZ4 506 aa15.89■□□□□ 0.14
GABRB3-215ENST00000622697 SEMA3GQ9NS98 782 aa15.89■□□□□ 0.14
GABRB3-215ENST00000622697 PCCBP05166 539 aa15.89■□□□□ 0.13
GABRB3-215ENST00000622697 SF1Q15637 639 aaKnown RBP15.89■□□□□ 0.13
GABRB3-215ENST00000622697 MS4A13Q5J8X5 152 aa15.89■□□□□ 0.13
GABRB3-215ENST00000622697 ART5Q96L15 291 aa15.89■□□□□ 0.13
GABRB3-215ENST00000622697 TLL1O43897 1013 aa15.89■□□□□ 0.13
GABRB3-215ENST00000622697 KERAO60938 352 aa15.89■□□□□ 0.13
GABRB3-215ENST00000622697 FYNP06241 537 aa15.89■□□□□ 0.13
GABRB3-215ENST00000622697 BMP7P18075 431 aa15.89■□□□□ 0.13
GABRB3-215ENST00000622697 PPM1AP35813 382 aa15.89■□□□□ 0.13
GABRB3-215ENST00000622697 COPZ1P61923 177 aa15.89■□□□□ 0.13
GABRB3-215ENST00000622697 NOGQ13253 232 aa15.89■□□□□ 0.13
GABRB3-215ENST00000622697 CRHR2Q13324 411 aa15.89■□□□□ 0.13
GABRB3-215ENST00000622697 MED27Q6P2C8 311 aa15.89■□□□□ 0.13
GABRB3-215ENST00000622697 CILP2Q8IUL8 1156 aa15.89■□□□□ 0.13
GABRB3-215ENST00000622697 C11orf65Q8NCR3 313 aa15.89■□□□□ 0.13
GABRB3-215ENST00000622697 SLC7A6OSQ96CW6 309 aaPredicted RBP15.89■□□□□ 0.13
GABRB3-215ENST00000622697 ZNF778Q96MU6 729 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms