RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 CYP7B1O75881 506 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 OLFM2O95897 454 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 NCK1P16333 377 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 ITGB6P18564 788 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 CTHP32929 405 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 SOX6P35712 828 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 RAB14P61106 215 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 CRADDP78560 199 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 IRF9Q00978 393 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 LIPEQ05469 1076 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 FRG1Q14331 258 aaKnown RBP7.8□□□□□ -1.16
VPS11-209ENST00000622309 CAPRIN1Q14444 709 aaKnown RBP7.8□□□□□ -1.16
VPS11-209ENST00000622309 POU4F3Q15319 338 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 TAB1Q15750 504 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 KYAT1Q16773 422 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 KIF19Q2TAC6 998 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 EML3Q32P44 896 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 OR9I1Q8NGQ6 314 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 RAET1EQ8TD07 263 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 UBXN10Q96LJ8 280 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 FOPNLQ96NB1 174 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 RDH12Q96NR8 316 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 OR2A14Q96R47 310 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 SLC30A2Q9BRI3 323 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 SLC22A4Q9H015 551 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 SDCBP2Q9H190 292 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 LTB4R2Q9NPC1 389 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 COPS3Q9UNS2 423 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 LTBP3Q9NS15 1303 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 TRAV20A0A0B4J274 112 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 LOC100506127A0A0U1RQW1 187 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 CHURC1-FNTBB4DL54 471 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 FAM86B1E9PN63 330 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 G3V2T6 193 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 EEF2KO00418 725 aaKnown RBP7.8□□□□□ -1.16
VPS11-209ENST00000622309 BTN3A1O00481 513 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 GNGT2O14610 69 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 MSH4O15457 936 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 NUPL2O15504 423 aaKnown RBP7.8□□□□□ -1.16
VPS11-209ENST00000622309 RRP8O43159 456 aaKnown RBP7.8□□□□□ -1.16
VPS11-209ENST00000622309 CABYRO75952 493 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 DNTTP04053 509 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 CYBBP04839 570 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 ACO1P21399 889 aaKnown RBP7.8□□□□□ -1.16
VPS11-209ENST00000622309 MAOBP27338 520 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 RPL9P32969 192 aaKnown RBP7.8□□□□□ -1.16
VPS11-209ENST00000622309 TIE1P35590 1138 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 MAPKAPK2P49137 400 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 DGKQP52824 942 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 ARFIP1P53367 373 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 ERVFC1P60507 584 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 ERVK-8P63133 956 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 KCNAB2Q13303 367 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 BAATQ14032 418 aaPredicted RBP7.8□□□□□ -1.16
VPS11-209ENST00000622309 ANGPT1Q15389 498 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 SYT16Q17RD7 645 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 TIGD3Q6B0B8 471 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 CYB5R2Q6BCY4 276 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 ZYG11AQ6WRX3 759 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 MTMR14Q8NCE2 650 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 CPB2Q96IY4 423 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 SAMD11Q96NU1 681 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 CATSPERBQ9H7T0 1116 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 SMURF2Q9HAU4 748 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 FAM198AQ9UFP1 575 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 GTF2A1LQ9UNN4 478 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 ORC6Q9Y5N6 252 aa7.8□□□□□ -1.16
VPS11-209ENST00000622309 CDK5RAP2Q96SN8 1893 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 LOC100130705A0A1B0GUX0 176 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 NOBOXO60393 691 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 MAFO75444 373 aaPredicted RBP7.79□□□□□ -1.16
VPS11-209ENST00000622309 TNNC2P02585 160 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 ERVK-10P10266 1014 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 PCSK2P16519 638 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 RPS3P23396 243 aaKnown RBP eCLIP7.79□□□□□ -1.16
VPS11-209ENST00000622309 OR1G1P47890 313 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 SCNN1GP51170 649 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 LBX1P52954 281 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 SESN2P58004 480 aaPredicted RBP7.79□□□□□ -1.16
VPS11-209ENST00000622309 ALDH6A1Q02252 535 aaKnown RBP7.79□□□□□ -1.16
VPS11-209ENST00000622309 MVKQ03426 396 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 QPRTQ15274 297 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 PCBP1Q15365 356 aaKnown RBP eCLIP7.79□□□□□ -1.16
VPS11-209ENST00000622309 SPATS1Q496A3 300 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 VARS2Q5ST30 1063 aaKnown RBP7.79□□□□□ -1.16
VPS11-209ENST00000622309 RETSATQ6NUM9 610 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 SYVN1Q86TM6 617 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 PELI3Q8N2H9 469 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 OR6C4Q8NGE1 309 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 CNIH3Q8TBE1 160 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 UFD1Q92890 307 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 SLC38A4Q969I6 547 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 PRMT6Q96LA8 375 aaPredicted RBP7.79□□□□□ -1.16
VPS11-209ENST00000622309 CPNE1Q99829 537 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 TSEN34Q9BSV6 310 aaKnown RBP7.79□□□□□ -1.16
VPS11-209ENST00000622309 PPIL3Q9H2H8 161 aaKnown RBP7.79□□□□□ -1.16
VPS11-209ENST00000622309 MUC13Q9H3R2 512 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 LRFN2Q9ULH4 789 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 SCML1Q9UN30 329 aa7.79□□□□□ -1.16
VPS11-209ENST00000622309 TLR6Q9Y2C9 796 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms