RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 GLIPR1L2Q4G1C9 344 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 GAGE2EQ4V326 116 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 CCDC92Q53HC0 331 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-229ENST00000621897 ALS2CLQ60I27 953 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 GAGE2AQ6NT46 116 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 FASTKD5Q7L8L6 764 aaKnown RBP3.92□□□□□ -1.78
BRCA1-229ENST00000621897 GPALPP1Q8IXQ4 340 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 SCYL3Q8IZE3 742 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 DBF4BQ8NFT6 615 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 TBC1D16Q8TBP0 767 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 POMGNT1Q8WZA1 660 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 DAZLQ92904 295 aaKnown RBP3.92□□□□□ -1.78
BRCA1-229ENST00000621897 NCAPGQ9BPX3 1015 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 TUBB2BQ9BVA1 445 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 DNAJC18Q9H819 358 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 ERVMER34-1Q9H9K5 563 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 OLA1Q9NTK5 396 aaKnown RBP3.92□□□□□ -1.78
BRCA1-229ENST00000621897 OGFRQ9NZT2 677 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 GAGE2DQ9UEU5 116 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 A0A1B0GVY2 172 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 MYO1GB0I1T2 1018 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 ZNF197O14709 1029 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 TRMUO75648 421 aaKnown RBP3.91□□□□□ -1.78
BRCA1-229ENST00000621897 TPOP07202 933 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 H1F0P07305 194 aaKnown RBP3.91□□□□□ -1.78
BRCA1-229ENST00000621897 TM4SF1P30408 202 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 WNT5AP41221 380 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 PSMC4P43686 418 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 RGS19P49795 217 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 DLG2Q15700 870 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 ADAMTSL4-AS1Q5T5F5 129 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 FAM109BQ6ICB4 259 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-229ENST00000621897 MZT2BQ6NZ67 158 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 BHLHB9Q6PI77 547 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 C16orf54Q6UWD8 224 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 ZNF383Q8NA42 475 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 RSPH1Q8WYR4 309 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 USP6NLQ92738 828 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 TMEM143Q96AN5 459 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 ANKRD9Q96BM1 317 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-229ENST00000621897 DACH2Q96NX9 599 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 ATOH8Q96SQ7 321 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 OPRPNQ99935 248 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-229ENST00000621897 RTP3Q9BQQ7 232 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 WDR13Q9H1Z4 485 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 OLFML3Q9NRN5 406 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 SMC4Q9NTJ3 1288 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 ECHDC1Q9NTX5 307 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 NENFQ9UMX5 172 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 PCDHGA5Q9Y5G8 931 aa3.91□□□□□ -1.78
BRCA1-229ENST00000621897 SPIN1Q9Y657 262 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-229ENST00000621897 IGLV9-49A0A0B4J1Y8 123 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 MEIOCA2RUB1 952 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 DNM1LO00429 736 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 SH2B2O14492 632 aaPredicted RBP3.9□□□□□ -1.79
BRCA1-229ENST00000621897 USO1O60763 962 aaKnown RBP3.9□□□□□ -1.79
BRCA1-229ENST00000621897 MBD4O95243 580 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 CEACAM8P31997 349 aaPredicted RBP3.9□□□□□ -1.79
BRCA1-229ENST00000621897 ARL3P36405 182 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 CDH8P55286 799 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 PRAMEP78395 509 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 TOMM20Q15388 145 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 GCNT6Q5T4J0 391 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 ARHGEF16Q5VV41 709 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 ADALQ6DHV7 355 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 CHST9Q7L1S5 443 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 GALNT5Q7Z7M9 940 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 TICAM1Q8IUC6 712 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 ARID3BQ8IVW6 561 aaPredicted RBP3.9□□□□□ -1.79
BRCA1-229ENST00000621897 DNAJC22Q8N4W6 341 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 NGEFQ8N5V2 710 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 NKAIN3Q8N8D7 197 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 LINC00479Q96M42 142 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 CDK19Q9BWU1 502 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 ATAD3AQ9NVI7 634 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 NPAP1Q9NZP6 1156 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 SLC7A7Q9UM01 511 aa3.9□□□□□ -1.79
BRCA1-229ENST00000621897 A0A087X0M5 115 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 PRSS51A0A1B0GVH4 220 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 A0A1B0GX30 115 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 FAM170AA1A519 330 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 NDUFS4O43181 175 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 ARHGEF9O43307 516 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 ZFAND5O76080 213 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 EML2O95834 649 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 SCGB1D1O95968 90 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 CLTBP09497 229 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 FAM157CP0CG43 387 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 TNFAIP3P21580 790 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 NKX2-1P43699 371 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-229ENST00000621897 RXRGP48443 463 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 RPS18P62269 152 aaKnown RBP3.89□□□□□ -1.79
BRCA1-229ENST00000621897 NUCB1Q02818 461 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 P2RY6Q15077 328 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 TMEM154Q6P9G4 183 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 CORO6Q6QEF8 472 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 SLC16A9Q7RTY1 509 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 TEX11Q8IYF3 940 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 SCML4Q8N228 414 aa3.89□□□□□ -1.79
BRCA1-229ENST00000621897 CHCHD4Q8N4Q1 142 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 593 ms