RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 C10orf88Q9H8K7 445 aa16.27■□□□□ 0.2
TARDBP-225ENST00000621715 CROCCQ5TZA2 2017 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 TMEM150CB9EJG8 249 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 PRAMEF1O95521 474 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 AGTP01019 485 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 LDLRP01130 860 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 EPOP01588 193 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 CTSBP07858 339 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 AKT1P31749 480 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 LMAN1P49257 510 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 VAV2P52735 878 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 NR6A1Q15406 480 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 ZNF658BQ4V348 819 aaPredicted RBP16.26■□□□□ 0.19
TARDBP-225ENST00000621715 ZC3H18Q86VM9 953 aaKnown RBP16.26■□□□□ 0.19
TARDBP-225ENST00000621715 GLIS1Q8NBF1 620 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 OR8K5Q8NH50 307 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 ZNF398Q8TD17 642 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 TFB1MQ8WVM0 346 aaKnown RBP16.26■□□□□ 0.19
TARDBP-225ENST00000621715 INPP5DQ92835 1189 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 PNPLA2Q96AD5 504 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 HAUS1Q96CS2 278 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 SNRNP40Q96DI7 357 aaKnown RBP16.26■□□□□ 0.19
TARDBP-225ENST00000621715 CLIP3Q96DZ5 547 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 FCRL5Q96RD9 977 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 SRPK1Q96SB4 655 aaKnown RBP16.26■□□□□ 0.19
TARDBP-225ENST00000621715 SMAD5Q99717 465 aaKnown RBP16.26■□□□□ 0.19
TARDBP-225ENST00000621715 ZCCHC2Q9C0B9 1178 aaKnown RBP16.26■□□□□ 0.19
TARDBP-225ENST00000621715 GOLPH3Q9H4A6 298 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 SPTLC3Q9NUV7 552 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 IFNKQ9P0W0 207 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 ANKRD12Q6UB98 2062 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 POLEQ07864 2286 aa16.26■□□□□ 0.19
TARDBP-225ENST00000621715 SSU72P8A0A1W2PR75 194 aa16.25■□□□□ 0.19
TARDBP-225ENST00000621715 BTN3A1O00481 513 aa16.25■□□□□ 0.19
TARDBP-225ENST00000621715 CST8O60676 142 aa16.25■□□□□ 0.19
TARDBP-225ENST00000621715 DPM1O60762 260 aa16.25■□□□□ 0.19
TARDBP-225ENST00000621715 KLF7O75840 302 aaPredicted RBP16.25■□□□□ 0.19
TARDBP-225ENST00000621715 KLK3P07288 261 aaPredicted RBP16.25■□□□□ 0.19
TARDBP-225ENST00000621715 ZFXP17010 805 aaPredicted RBP16.25■□□□□ 0.19
TARDBP-225ENST00000621715 HLA-DPA1P20036 260 aa16.25■□□□□ 0.19
TARDBP-225ENST00000621715 GSDMDP57764 484 aa16.25■□□□□ 0.19
TARDBP-225ENST00000621715 XIAPP98170 497 aa16.25■□□□□ 0.19
TARDBP-225ENST00000621715 MSLNQ13421 630 aaPredicted RBP16.25■□□□□ 0.19
TARDBP-225ENST00000621715 NCF4Q15080 339 aa16.25■□□□□ 0.19
TARDBP-225ENST00000621715 BCL7AQ4VC05 210 aa16.25■□□□□ 0.19
TARDBP-225ENST00000621715 KAZNQ674X7 775 aa16.25■□□□□ 0.19
TARDBP-225ENST00000621715 SPOCD1Q6ZMY3 1216 aa16.25■□□□□ 0.19
TARDBP-225ENST00000621715 CPT1BQ92523 772 aa16.25■□□□□ 0.19
TARDBP-225ENST00000621715 CHP1Q99653 195 aa16.25■□□□□ 0.19
TARDBP-225ENST00000621715 ACTR5Q9H9F9 607 aaPredicted RBP16.25■□□□□ 0.19
TARDBP-225ENST00000621715 SLAMF7Q9NQ25 335 aa16.25■□□□□ 0.19
TARDBP-225ENST00000621715 ASF1BQ9NVP2 202 aa16.25■□□□□ 0.19
TARDBP-225ENST00000621715 GPR83Q9NYM4 423 aa16.25■□□□□ 0.19
TARDBP-225ENST00000621715 MAP10Q9P2G4 905 aa16.25■□□□□ 0.19
TARDBP-225ENST00000621715 FKBPLQ9UIM3 349 aa16.25■□□□□ 0.19
TARDBP-225ENST00000621715 DOCK10Q96BY6 2186 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 CSMD2Q7Z408 3487 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 GOLGA6L22H0YM25 854 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 H3BMH7 237 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 CBX6O95503 412 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 SLC35G4P0C7Q5 338 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 MSH3P20585 1137 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 CDH3P22223 829 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 PRDX3P30048 256 aaKnown RBP16.24■□□□□ 0.19
TARDBP-225ENST00000621715 PREPP48147 710 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 ITGA9Q13797 1035 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 LONRF2Q1L5Z9 754 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 TMTC4Q5T4D3 741 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 LRRC38Q5VT99 294 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 ZDHHC20Q5W0Z9 365 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 CDHR3Q6ZTQ4 885 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 MAMDC2Q7Z304 686 aaPredicted RBP16.24■□□□□ 0.19
TARDBP-225ENST00000621715 CFAP206Q8IYR0 622 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 CISD2Q8N5K1 135 aaKnown RBP16.24■□□□□ 0.19
TARDBP-225ENST00000621715 OR4K2Q8NGD2 314 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 ZFPM2Q8WW38 1151 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 LINC00615Q96LM1 132 aaPredicted RBP16.24■□□□□ 0.19
TARDBP-225ENST00000621715 APOL2Q9BQE5 337 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 PITPNM3Q9BZ71 974 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 FAM96AQ9H5X1 160 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 ZBTB20Q9HC78 741 aaPredicted RBP16.24■□□□□ 0.19
TARDBP-225ENST00000621715 FAM60AQ9NP50 221 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 C1GALT1Q9NS00 363 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 HACD3Q9P035 362 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 KLHL8Q9P2G9 620 aaPredicted RBP16.24■□□□□ 0.19
TARDBP-225ENST00000621715 ACSL5Q9ULC5 683 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 NTNG1Q9Y2I2 539 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 PKP3Q9Y446 797 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 PCDHGB7Q9Y5F8 929 aa16.24■□□□□ 0.19
TARDBP-225ENST00000621715 DIDO1Q9BTC0 2240 aaKnown RBP16.24■□□□□ 0.19
TARDBP-225ENST00000621715 SYCE3A1L190 88 aa16.23■□□□□ 0.19
TARDBP-225ENST00000621715 GSAPA4D1B5 854 aa16.23■□□□□ 0.19
TARDBP-225ENST00000621715 CCL22O00626 93 aa16.23■□□□□ 0.19
TARDBP-225ENST00000621715 ZNF749O43361 778 aa16.23■□□□□ 0.19
TARDBP-225ENST00000621715 CNOT3O75175 753 aaKnown RBP16.23■□□□□ 0.19
TARDBP-225ENST00000621715 SRP72O76094 671 aaKnown RBP16.23■□□□□ 0.19
TARDBP-225ENST00000621715 ATXN8OSP0DMR3 200 aa16.23■□□□□ 0.19
TARDBP-225ENST00000621715 COMTP21964 271 aa16.23■□□□□ 0.19
TARDBP-225ENST00000621715 PDHA2P29803 388 aa16.23■□□□□ 0.19
TARDBP-225ENST00000621715 ARHGAP25P42331 645 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms