RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 KYNUQ16719 465 aa18.16■□□□□ 0.5
CIRBP-245ENST00000621399 CYS1Q717R9 158 aa18.16■□□□□ 0.5
CIRBP-245ENST00000621399 SPRED1Q7Z699 444 aa18.16■□□□□ 0.5
CIRBP-245ENST00000621399 GALNT7Q86SF2 657 aa18.16■□□□□ 0.5
CIRBP-245ENST00000621399 RELL1Q8IUW5 271 aa18.16■□□□□ 0.5
CIRBP-245ENST00000621399 CHCHD4Q8N4Q1 142 aa18.16■□□□□ 0.5
CIRBP-245ENST00000621399 SLC40A1Q9NP59 571 aa18.16■□□□□ 0.5
CIRBP-245ENST00000621399 NSMCE4AQ9NXX6 385 aa18.16■□□□□ 0.5
CIRBP-245ENST00000621399 KCNK4Q9NYG8 393 aa18.16■□□□□ 0.5
CIRBP-245ENST00000621399 GOLGA4Q13439 2230 aaKnown RBP18.15■□□□□ 0.5
CIRBP-245ENST00000621399 B4GAT1O43505 415 aa18.15■□□□□ 0.5
CIRBP-245ENST00000621399 GPC4O75487 556 aa18.15■□□□□ 0.5
CIRBP-245ENST00000621399 PIAS1O75925 651 aa18.15■□□□□ 0.5
CIRBP-245ENST00000621399 STX2P32856 288 aa18.15■□□□□ 0.5
CIRBP-245ENST00000621399 ABCG1P45844 678 aa18.15■□□□□ 0.5
CIRBP-245ENST00000621399 PPM1FP49593 454 aaPredicted RBP18.15■□□□□ 0.5
CIRBP-245ENST00000621399 INSM1Q01101 510 aaPredicted RBP18.15■□□□□ 0.5
CIRBP-245ENST00000621399 NR1D2Q14995 579 aa18.15■□□□□ 0.5
CIRBP-245ENST00000621399 AMZ1Q400G9 498 aa18.15■□□□□ 0.5
CIRBP-245ENST00000621399 DUS1LQ6P1R4 473 aaKnown RBP18.15■□□□□ 0.5
CIRBP-245ENST00000621399 STRA8Q7Z7C7 330 aa18.15■□□□□ 0.5
CIRBP-245ENST00000621399 PDZD3Q86UT5 571 aa18.15■□□□□ 0.5
CIRBP-245ENST00000621399 SLC26A11Q86WA9 606 aa18.15■□□□□ 0.5
CIRBP-245ENST00000621399 RBM12BQ8IXT5 1001 aaKnown RBP18.15■□□□□ 0.5
CIRBP-245ENST00000621399 KCNJ9Q92806 393 aa18.15■□□□□ 0.5
CIRBP-245ENST00000621399 FERD3LQ96RJ6 166 aa18.15■□□□□ 0.5
CIRBP-245ENST00000621399 NDNQ99608 321 aa18.15■□□□□ 0.5
CIRBP-245ENST00000621399 AARSD1Q9BTE6 412 aaKnown RBP18.15■□□□□ 0.5
CIRBP-245ENST00000621399 LRRN3Q9H3W5 708 aa18.15■□□□□ 0.5
CIRBP-245ENST00000621399 SMYD2Q9NRG4 433 aa18.15■□□□□ 0.5
CIRBP-245ENST00000621399 NINJ2Q9NZG7 142 aa18.15■□□□□ 0.5
CIRBP-245ENST00000621399 HEBP2Q9Y5Z4 205 aa18.15■□□□□ 0.5
CIRBP-245ENST00000621399 COLEC10Q9Y6Z7 277 aa18.15■□□□□ 0.5
CIRBP-245ENST00000621399 NCOR2Q9Y618 2525 aa18.14■□□□□ 0.49
CIRBP-245ENST00000621399 CASC3O15234 703 aaKnown RBP18.14■□□□□ 0.49
CIRBP-245ENST00000621399 PHBP35232 272 aa18.14■□□□□ 0.49
CIRBP-245ENST00000621399 CLDN6P56747 220 aa18.14■□□□□ 0.49
CIRBP-245ENST00000621399 GPR18Q14330 331 aa18.14■□□□□ 0.49
CIRBP-245ENST00000621399 PLEKHS1Q5SXH7 462 aa18.14■□□□□ 0.49
CIRBP-245ENST00000621399 TMEM26Q6ZUK4 368 aa18.14■□□□□ 0.49
CIRBP-245ENST00000621399 RAB44Q7Z6P3 723 aaPredicted RBP18.14■□□□□ 0.49
CIRBP-245ENST00000621399 VRK3Q8IV63 474 aa18.14■□□□□ 0.49
CIRBP-245ENST00000621399 SLC22A15Q8IZD6 547 aa18.14■□□□□ 0.49
CIRBP-245ENST00000621399 ZBTB2Q8N680 514 aa18.14■□□□□ 0.49
CIRBP-245ENST00000621399 WDR48Q8TAF3 677 aa18.14■□□□□ 0.49
CIRBP-245ENST00000621399 FBF1Q8TES7 1133 aa18.14■□□□□ 0.49
CIRBP-245ENST00000621399 TFGQ92734 400 aaPredicted RBP18.14■□□□□ 0.49
CIRBP-245ENST00000621399 AHCYL2Q96HN2 611 aaKnown RBP18.14■□□□□ 0.49
CIRBP-245ENST00000621399 GFM1Q96RP9 751 aaKnown RBP18.14■□□□□ 0.49
CIRBP-245ENST00000621399 UCK1Q9HA47 277 aa18.14■□□□□ 0.49
CIRBP-245ENST00000621399 TXNDC16Q9P2K2 825 aa18.14■□□□□ 0.49
CIRBP-245ENST00000621399 GALPQ9UBC7 116 aa18.14■□□□□ 0.49
CIRBP-245ENST00000621399 CDYLQ9Y232 598 aa18.14■□□□□ 0.49
CIRBP-245ENST00000621399 PSAT1Q9Y617 370 aa18.14■□□□□ 0.49
CIRBP-245ENST00000621399 ARHGEF17Q96PE2 2063 aaPredicted RBP18.14■□□□□ 0.49
CIRBP-245ENST00000621399 A0A1W2PQM1 296 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 FAM159BA6NKW6 160 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 CXorf49A8MYA2 514 aaPredicted RBP18.13■□□□□ 0.49
CIRBP-245ENST00000621399 VPS26AO75436 327 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 SLCO2B1O94956 709 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 NDUFS1P28331 727 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 MAPK9P45984 424 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 CLCN7P51798 805 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 ABRQ12979 859 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 SPIDRQ14159 915 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 SLMAPQ14BN4 828 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 TTLL9Q3SXZ7 439 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 HES3Q5TGS1 186 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 NKAIN2Q5VXU1 208 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 TMPRSS12Q86WS5 348 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 CTAGE3PQ8IX95 158 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 GALNT15Q8N3T1 639 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 GPATCH11Q8N954 259 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 SIDT2Q8NBJ9 832 aaKnown RBP18.13■□□□□ 0.49
CIRBP-245ENST00000621399 PHC3Q8NDX5 983 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 OR10G6Q8NH81 332 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 SKA2Q8WVK7 121 aaPredicted RBP18.13■□□□□ 0.49
CIRBP-245ENST00000621399 ATXN7L3BQ96GX2 97 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 TBC1D10AQ9BXI6 508 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 CDC42EP4Q9H3Q1 356 aaKnown RBP18.13■□□□□ 0.49
CIRBP-245ENST00000621399 LATS2Q9NRM7 1088 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 CORO1CQ9ULV4 474 aaPredicted RBP18.13■□□□□ 0.49
CIRBP-245ENST00000621399 ASF1AQ9Y294 204 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 MED16Q9Y2X0 877 aa18.13■□□□□ 0.49
CIRBP-245ENST00000621399 IGHV1OR21-1A0A087WYE8 117 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 LILRA5A6NI73 299 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 NTN3O00634 580 aaPredicted RBP18.12■□□□□ 0.49
CIRBP-245ENST00000621399 HYAL3O43820 417 aaPredicted RBP18.12■□□□□ 0.49
CIRBP-245ENST00000621399 MT-CO3P00414 261 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 ADRB1P08588 477 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 JUPP14923 745 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 ACADLP28330 430 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 CD1CP29017 333 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 EPHA4P54764 986 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 GPLD1P80108 840 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 KBTBD12Q3ZCT8 623 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 RBM20Q5T481 1227 aaKnown RBP18.12■□□□□ 0.49
CIRBP-245ENST00000621399 UGT3A1Q6NUS8 523 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 RBM44Q6ZP01 1051 aaKnown RBP18.12■□□□□ 0.49
CIRBP-245ENST00000621399 USP53Q70EK8 1073 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms