RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 TCRBV7S2A1N4TA0A589 114 aa11.21□□□□□ -0.62
CLIP1-219ENST00000620786 TPD52L2O43399 206 aaKnown RBP11.21□□□□□ -0.62
CLIP1-219ENST00000620786 TLX3O43711 291 aaPredicted RBP11.21□□□□□ -0.62
CLIP1-219ENST00000620786 KCNQ1P51787 676 aa11.21□□□□□ -0.62
CLIP1-219ENST00000620786 MYLK3Q32MK0 819 aa11.21□□□□□ -0.62
CLIP1-219ENST00000620786 NAIF1Q69YI7 327 aaPredicted RBP11.21□□□□□ -0.62
CLIP1-219ENST00000620786 FBXL22Q6P050 247 aa11.21□□□□□ -0.62
CLIP1-219ENST00000620786 GALNT5Q7Z7M9 940 aa11.21□□□□□ -0.62
CLIP1-219ENST00000620786 SAMD14Q8IZD0 417 aaPredicted RBP11.21□□□□□ -0.62
CLIP1-219ENST00000620786 TTLQ8NG68 377 aa11.21□□□□□ -0.62
CLIP1-219ENST00000620786 TMEM138Q9NPI0 162 aa11.21□□□□□ -0.62
CLIP1-219ENST00000620786 PDP1Q9P0J1 537 aaPredicted RBP11.21□□□□□ -0.62
CLIP1-219ENST00000620786 SSR3Q9UNL2 185 aa11.21□□□□□ -0.62
CLIP1-219ENST00000620786 LRCH1Q9Y2L9 728 aa11.21□□□□□ -0.62
CLIP1-219ENST00000620786 PPEF2O14830 753 aa11.21□□□□□ -0.62
CLIP1-219ENST00000620786 LYNP07948 512 aa11.21□□□□□ -0.62
CLIP1-219ENST00000620786 HAPLN1P10915 354 aaPredicted RBP11.21□□□□□ -0.62
CLIP1-219ENST00000620786 PRKCHP24723 683 aa11.21□□□□□ -0.62
CLIP1-219ENST00000620786 CTSKP43235 329 aa11.21□□□□□ -0.62
CLIP1-219ENST00000620786 POU5F1Q01860 360 aaKnown RBP11.21□□□□□ -0.62
CLIP1-219ENST00000620786 SNAPC1Q16533 368 aa11.21□□□□□ -0.62
CLIP1-219ENST00000620786 SLC9B2Q86UD5 537 aa11.21□□□□□ -0.62
CLIP1-219ENST00000620786 PCDHGA11Q9Y5H2 935 aa11.21□□□□□ -0.62
CLIP1-219ENST00000620786 TCRBV21S2A2A0A5A6 115 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 STX16-NPEPL1H3BU86 382 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 PEX12O00623 359 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 STX16O14662 325 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 HLA-DQB2P05538 268 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 GNAZP19086 355 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 SLC1A2P43004 574 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 CCR10P46092 362 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 DNASE1L1P49184 302 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 PTP4A2Q12974 167 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 SLC1A5Q15758 541 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 ITPRIPL2Q3MIP1 535 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 NAPRTQ6XQN6 538 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 CMTM8Q8IZV2 173 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 CRYBG2Q8N1P7 616 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 OR13C4Q8NGS5 318 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 PIGXQ8TBF5 258 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 NKD2Q969F2 451 aaPredicted RBP11.2□□□□□ -0.62
CLIP1-219ENST00000620786 FBXL18Q96ME1 805 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 MINDY3Q9H8M7 445 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 PLEKHA1Q9HB21 404 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 SLC2A4RGQ9NR83 387 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 SLC7A4O43246 635 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 ASNA1O43681 348 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 KLF8O95600 359 aaPredicted RBP11.2□□□□□ -0.62
CLIP1-219ENST00000620786 AHCYP23526 432 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 DCST1Q5T197 706 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 AVL9Q8NBF6 648 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 PCDH19Q8TAB3 1148 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 PRPF19Q9UMS4 504 aaKnown RBP11.2□□□□□ -0.62
CLIP1-219ENST00000620786 A0A0J9YVX5 310 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 CAPN14A8MX76 684 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 KPNA4O00629 521 aaPredicted RBP11.2□□□□□ -0.62
CLIP1-219ENST00000620786 UGT1A9O60656 530 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 IFNW1P05000 195 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 UGT1A6P19224 532 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 UGT1A1P22309 533 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 UGT1A4P22310 534 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 UGT1A3P35503 534 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 LSM3P62310 102 aaKnown RBP11.2□□□□□ -0.62
CLIP1-219ENST00000620786 CCINQ13939 588 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 PIK3R6Q5UE93 754 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 GLYATQ6IB77 296 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 TMPRSS11AQ6ZMR5 421 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 TMEM145Q8NBT3 493 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 OR7A2PQ8NGA2 310 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 UGT1A7Q9HAW7 530 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 UGT1A10Q9HAW8 530 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 UGT1A8Q9HAW9 530 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 PHF11Q9UIL8 331 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 NOCTQ9UK39 431 aaKnown RBP11.2□□□□□ -0.62
CLIP1-219ENST00000620786 CFAP20Q9Y6A4 193 aaKnown RBP11.2□□□□□ -0.62
CLIP1-219ENST00000620786 ANKRD26Q9UPS8 1709 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 A0A0G2JN53 185 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 UPK3BL1B0FP48 263 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 UPK3BL2E5RIL1 263 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 GABRDO14764 452 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 NDUFS4O43181 175 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 MTX2O75431 263 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 SASH3O75995 380 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 KLK3P07288 261 aaPredicted RBP11.2□□□□□ -0.62
CLIP1-219ENST00000620786 DBTP11182 482 aaKnown RBP11.2□□□□□ -0.62
CLIP1-219ENST00000620786 CLCNKAP51800 687 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 ITGADQ13349 1161 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 MLIPQ5VWP3 458 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 TCEAL6Q6IPX3 200 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 FSTL4Q6MZW2 842 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 SLC29A4Q7RTT9 530 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 PARP8Q8N3A8 854 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 OR2AP1Q8NGE2 309 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 PIGKQ92643 395 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 ANKRD27Q96NW4 1050 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 NTPCRQ9BSD7 190 aaKnown RBP11.2□□□□□ -0.62
CLIP1-219ENST00000620786 EIF2B3Q9NR50 452 aaKnown RBP11.2□□□□□ -0.62
CLIP1-219ENST00000620786 DTLQ9NZJ0 730 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 COMMD9Q9P000 198 aa11.2□□□□□ -0.62
CLIP1-219ENST00000620786 IGSF9Q9P2J2 1179 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms