RNA–Protein interactions for RNA: ENST00000618361.4

CBWD1-227, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-227ENST00000618361 RBM22Q9NW64 420 aaKnown RBP eCLIP7.55□□□□□ -1.2
CBWD1-227ENST00000618361 NDOR1Q9UHB4 597 aa7.55□□□□□ -1.2
CBWD1-227ENST00000618361 SLC24A2Q9UI40 661 aa7.55□□□□□ -1.2
CBWD1-227ENST00000618361 COLEC10Q9Y6Z7 277 aa7.55□□□□□ -1.2
CBWD1-227ENST00000618361 H3BMH7 237 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 PES1O00541 588 aaKnown RBP7.54□□□□□ -1.2
CBWD1-227ENST00000618361 MTX2O75431 263 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 POP7O75817 140 aaKnown RBP7.54□□□□□ -1.2
CBWD1-227ENST00000618361 UMODP07911 640 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 HLA-DPA1P20036 260 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 MMP11P24347 488 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 CCNCP24863 283 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 EEF1GP26641 437 aaKnown RBP7.54□□□□□ -1.2
CBWD1-227ENST00000618361 ART1P52961 327 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 KCNK10P57789 538 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 PPP2R2AP63151 447 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 TLE4Q04727 773 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 RBPJQ06330 500 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 NIPAL4Q0D2K0 466 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 GALNT2Q10471 571 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 MFAP5Q13361 173 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 XRCC4Q13426 336 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 GALNT3Q14435 633 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 PRKD1Q15139 912 aaPredicted RBP7.54□□□□□ -1.2
CBWD1-227ENST00000618361 KHDC1Q4VXA5 237 aaKnown RBP7.54□□□□□ -1.2
CBWD1-227ENST00000618361 ALS2CLQ60I27 953 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 ISLR2Q6UXK2 745 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 GFRALQ6UXV0 394 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 GPR135Q8IZ08 494 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 TTC30BQ8N4P2 665 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 ACBD4Q8NC06 268 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 CPLX3Q8WVH0 158 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 NANOS1Q8WY41 292 aaKnown RBP7.54□□□□□ -1.2
CBWD1-227ENST00000618361 MTFMTQ96DP5 389 aaKnown RBP7.54□□□□□ -1.2
CBWD1-227ENST00000618361 VPS50Q96JG6 964 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 CNDP1Q96KN2 507 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 CHRNA10Q9GZZ6 450 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 LHPPQ9H008 270 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 ENKD1Q9H0I2 346 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 NLRC4Q9NPP4 1024 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 IMP3Q9NV31 184 aaKnown RBP7.54□□□□□ -1.2
CBWD1-227ENST00000618361 SEPT11Q9NVA2 429 aaKnown RBP7.54□□□□□ -1.2
CBWD1-227ENST00000618361 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.54□□□□□ -1.2
CBWD1-227ENST00000618361 IFT80Q9P2H3 777 aaPredicted RBP7.54□□□□□ -1.2
CBWD1-227ENST00000618361 TMPRSS11EQ9UL52 423 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 ACSL5Q9ULC5 683 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 PKDREJQ9NTG1 2253 aa7.54□□□□□ -1.2
CBWD1-227ENST00000618361 CLDN14O95500 239 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 ONECUT2O95948 504 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 CRYABP02511 175 aaKnown RBP7.53□□□□□ -1.2
CBWD1-227ENST00000618361 ALBP02768 609 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 MMP2P08253 660 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 CCDC172P0C7W6 258 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 CBSLP0DN79 551 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 PYGMP11217 842 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 ESRRAP11474 423 aaPredicted RBP7.53□□□□□ -1.2
CBWD1-227ENST00000618361 ST6GAL1P15907 406 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 POLR2CP19387 275 aaPredicted RBP7.53□□□□□ -1.2
CBWD1-227ENST00000618361 PRDX3P30048 256 aaKnown RBP7.53□□□□□ -1.2
CBWD1-227ENST00000618361 CBSP35520 551 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 NFE2L1Q14494 772 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 IFI16Q16666 785 aaKnown RBP7.53□□□□□ -1.2
CBWD1-227ENST00000618361 TCP11X2Q5H9J9 407 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 LDLRAP1Q5SW96 308 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 ZDHHC20Q5W0Z9 365 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 FBXO38Q6PIJ6 1188 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 TAOK1Q7L7X3 1001 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 ACVR1CQ8NER5 493 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 DNAJB8Q8NHS0 232 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 FKBP10Q96AY3 582 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 C12orf66Q96MD2 445 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 PPM1MQ96MI6 270 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 TRIB3Q96RU7 358 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 INSM2Q96T92 566 aaPredicted RBP7.53□□□□□ -1.2
CBWD1-227ENST00000618361 TREX2Q9BQ50 279 aaPredicted RBP7.53□□□□□ -1.2
CBWD1-227ENST00000618361 KRTAP3-3Q9BYR6 98 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 KRTAP3-2Q9BYR7 98 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 MRM3Q9HC36 420 aaKnown RBP7.53□□□□□ -1.2
CBWD1-227ENST00000618361 SLC6A20Q9NP91 592 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 ABI3Q9P2A4 366 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 FBXL4Q9UKA2 621 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 PSMD13Q9UNM6 376 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 NEU2Q9Y3R4 380 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 HEBP2Q9Y5Z4 205 aa7.53□□□□□ -1.2
CBWD1-227ENST00000618361 TRAV17A0A0B4J275 112 aa7.52□□□□□ -1.21
CBWD1-227ENST00000618361 CCDC78A2IDD5 438 aa7.52□□□□□ -1.21
CBWD1-227ENST00000618361 GSAPA4D1B5 854 aa7.52□□□□□ -1.21
CBWD1-227ENST00000618361 MGAT4DA6NG13 374 aa7.52□□□□□ -1.21
CBWD1-227ENST00000618361 C19orf84I3L1E1 186 aa7.52□□□□□ -1.21
CBWD1-227ENST00000618361 MASP2O00187 686 aa7.52□□□□□ -1.21
CBWD1-227ENST00000618361 EPHB6O15197 1021 aa7.52□□□□□ -1.21
CBWD1-227ENST00000618361 CNOT3O75175 753 aaKnown RBP7.52□□□□□ -1.21
CBWD1-227ENST00000618361 PMPCBO75439 489 aa7.52□□□□□ -1.21
CBWD1-227ENST00000618361 OR2B3O76000 313 aa7.52□□□□□ -1.21
CBWD1-227ENST00000618361 UNC5CO95185 931 aa7.52□□□□□ -1.21
CBWD1-227ENST00000618361 HLA-DQB2P05538 268 aa7.52□□□□□ -1.21
CBWD1-227ENST00000618361 MYBL2P10244 700 aa7.52□□□□□ -1.21
CBWD1-227ENST00000618361 RARAP10276 462 aa7.52□□□□□ -1.21
CBWD1-227ENST00000618361 PIM1P11309 404 aaPredicted RBP7.52□□□□□ -1.21
CBWD1-227ENST00000618361 IL1R2P27930 398 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms