RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 TSPAN9O75954 239 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 AGR2O95994 175 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 ZNF20P17024 532 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 CLCNKBP51801 687 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 UBXN11Q5T124 520 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 SVOPLQ8N434 492 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 TMEM145Q8NBT3 493 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 KLHL5Q96PQ7 755 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 TBL1XR1Q9BZK7 514 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 SLC25A51Q9H1U9 297 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 PDPK1O15530 556 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 NUAK1O60285 661 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 CALCAP01258 141 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 TXNL4AP83876 142 aaKnown RBP11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 KLHL22Q53GT1 634 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 PLCZ1Q86YW0 608 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 INO80EQ8NBZ0 244 aaPredicted RBP11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 SMPDL3BQ92485 455 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 DIRAS2Q96HU8 199 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 HEPHQ9BQS7 1158 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 C11orf84Q9BUA3 381 aaPredicted RBP11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 ZNF717Q9BY31 904 aaPredicted RBP11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 SEZ6LQ9BYH1 1024 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 TCF7L1Q9HCS4 588 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 CD84Q9UIB8 345 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 PCDHGB1Q9Y5G3 927 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 PCDHA2Q9Y5H9 948 aa11.02□□□□□ -0.65
CCDC144B-208ENST00000618081 SCDO00767 359 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 NUDT17P0C025 328 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 NR2C1P13056 603 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 HCAR3P49019 387 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 SP140Q13342 867 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 INTS6LQ5JSJ4 861 aaKnown RBP11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 CCSAPQ6IQ19 270 aaPredicted RBP11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 OVCA2Q8WZ82 227 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 PNPLA2Q96AD5 504 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 ZNF570Q96NI8 536 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 FARSBQ9NSD9 589 aaKnown RBP11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 PADI3Q9ULW8 664 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 SRRM3A6NNA2 597 aaPredicted RBP11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 KAT7O95251 611 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 TNFP01375 233 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 PBX3P40426 434 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 TAF1AQ15573 450 aaPredicted RBP11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 GFOD2Q3B7J2 385 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 ZFP69Q49AA0 526 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 GLYATQ6IB77 296 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 ARL10Q8N8L6 244 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 PNO1Q9NRX1 252 aaKnown RBP11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 MAGEB17A8MXT2 336 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 PI15O43692 258 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 CFIP05156 583 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 LINGO3P0C6S8 592 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 ITIH1P19827 911 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 NRG1Q02297 640 aaPredicted RBP11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 RNASE12Q5GAN4 147 aaKnown RBP11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 ECHDC2Q86YB7 292 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 FUKQ8N0W3 1084 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 ARNTL2Q8WYA1 636 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 DNAJC28Q9NX36 388 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 IL36AQ9UHA7 158 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 PCDHGA11Q9Y5H2 935 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 AP4B1Q9Y6B7 739 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 LCP2Q13094 533 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 AMIGO2Q86SJ2 522 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 SLC22A15Q8IZD6 547 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 UFD1Q92890 307 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 PSKH2Q96QS6 385 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 GPR21Q99679 349 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 IPPKQ9H8X2 491 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 CRTAC1Q9NQ79 661 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 DNAAF2Q9NVR5 837 aaKnown RBP11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 EVLQ9UI08 416 aaPredicted RBP11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 ADRA1BP35368 520 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 ALG1LQ6GMV1 187 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 GPR151Q8TDV0 419 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 BORCS5Q969J3 196 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 NDC1Q9BTX1 674 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 ACP6Q9NPH0 428 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 SLC6A9P48067 706 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 SCN1BQ07699 218 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 AMZ1Q400G9 498 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 ISLR2Q6UXK2 745 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 PQLC1Q8N2U9 271 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 OR5B17Q8NGF7 314 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 NXPE2Q96DL1 559 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 FBXO9Q9UK97 447 aaPredicted RBP11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 FAM208AQ9UK61 1670 aaKnown RBP11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 ILVBLA1L0T0 632 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 B4GALT5O43286 388 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 NADKO95544 446 aaPredicted RBP11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 BPGMP07738 259 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 BRCC3P46736 316 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 CDKL1Q00532 357 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 MC1RQ01726 317 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 TMEM220Q6QAJ8 160 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 GLB1L3Q8NCI6 653 aaPredicted RBP11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 OR6K6Q8NGW6 343 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 GPR88Q9GZN0 384 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms