RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 MYF5P13349 255 aa15.28■□□□□ 0.04
PCDHGC3-204ENST00000617222 HALP42357 657 aa15.28■□□□□ 0.04
PCDHGC3-204ENST00000617222 ABRQ12979 859 aa15.28■□□□□ 0.04
PCDHGC3-204ENST00000617222 ZNF460Q14592 562 aa15.28■□□□□ 0.04
PCDHGC3-204ENST00000617222 INAVAQ3KP66 663 aa15.28■□□□□ 0.04
PCDHGC3-204ENST00000617222 LGSNQ5TDP6 509 aa15.28■□□□□ 0.04
PCDHGC3-204ENST00000617222 CAPRIN2Q6IMN6 1127 aaKnown RBP15.28■□□□□ 0.04
PCDHGC3-204ENST00000617222 CPNE9Q8IYJ1 553 aa15.28■□□□□ 0.04
PCDHGC3-204ENST00000617222 SLC22A15Q8IZD6 547 aa15.28■□□□□ 0.04
PCDHGC3-204ENST00000617222 EPS8L3Q8TE67 593 aaKnown RBP15.28■□□□□ 0.04
PCDHGC3-204ENST00000617222 TSPAN17Q96FV3 270 aa15.28■□□□□ 0.04
PCDHGC3-204ENST00000617222 RMDN2Q96LZ7 410 aa15.28■□□□□ 0.04
PCDHGC3-204ENST00000617222 PSMC3IPQ9P2W1 217 aaPredicted RBP15.28■□□□□ 0.04
PCDHGC3-204ENST00000617222 CFAP20Q9Y6A4 193 aaKnown RBP15.28■□□□□ 0.04
PCDHGC3-204ENST00000617222 PTPRZ1P23471 2315 aaPredicted RBP15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 DMDP11532 3685 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 OR5K4A6NMS3 321 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 OR52A4PA6NMU1 304 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 TRIM49D1C9J1S8 452 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 IFRD1O00458 451 aaPredicted RBP15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 RASGRF2O14827 1237 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 TCEA3O75764 348 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 KRT37O76014 449 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 SNRPAP09012 282 aaKnown RBP15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 SLC2A4P14672 509 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 H2AFXP16104 143 aaPredicted RBP15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 STMN1P16949 149 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 CNTFP26441 200 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 GRK6P43250 576 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 MAZP56270 477 aaKnown RBP15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 RAB10P61026 200 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 GBX1Q14549 363 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 RPE65Q16518 533 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 ZCCHC8Q6NZY4 707 aaKnown RBP15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 FBXO38Q6PIJ6 1188 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 TMEM207Q6UWW9 146 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 CMC1Q7Z7K0 106 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 IQCKQ8N0W5 287 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 ARL14Q8N4G2 192 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 KYQ8NBH2 561 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 GPR156Q8NFN8 814 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 CFAP61Q8NHU2 1237 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 EEF1AKMT1Q8WVE0 214 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 SKA2Q8WVK7 121 aaPredicted RBP15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 GLMNQ92990 594 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 APOLD1Q96LR9 279 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 C12orf66Q96MD2 445 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 CAMK1GQ96NX5 476 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 PPCSQ9HAB8 311 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 ZNF624Q9P2J8 865 aaPredicted RBP15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 CTNNAL1Q9UBT7 734 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 TBK1Q9UHD2 729 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 NFS1Q9Y697 457 aa15.27■□□□□ 0.04
PCDHGC3-204ENST00000617222 MYO15AQ9UKN7 3530 aa15.27■□□□□ 0.03
PCDHGC3-204ENST00000617222 KIR2DS5A0A0G2JLQ3 304 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 A0A0G2JNG1 304 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 IQANK1A0A1B0GTG1 560 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 KIR2DS3K7RE56 304 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 CBSLP0DN79 551 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 ACADLP28330 430 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 CRABP2P29373 138 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 TYK2P29597 1187 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 CBSP35520 551 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 SLC19A1P41440 591 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 RGS4P49798 205 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 LIMK1P53667 647 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 IL2P60568 153 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 KIR2DS5Q14953 304 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 ZKSCAN8Q15776 578 aaPredicted RBP15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 C14orf28Q4W4Y0 310 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 CYHR1Q6ZMK1 362 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 RAPH1Q70E73 1250 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 PDZD3Q86UT5 571 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 TDRPQ86YL5 185 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 NAXDQ8IW45 347 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 SLC35F3Q8IY50 421 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 SFRP1Q8N474 314 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 ARL10Q8N8L6 244 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 FAM181AQ8N9Y4 354 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 PHC3Q8NDX5 983 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 MAPK15Q8TD08 544 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 SLC37A2Q8TED4 501 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 TFGQ92734 400 aaPredicted RBP15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 ZBTB9Q96C00 473 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 ROPN1BQ9BZX4 212 aaPredicted RBP15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 ROPN1Q9HAT0 212 aaPredicted RBP15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 POPDC3Q9HBV1 291 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 SYTL2Q9HCH5 934 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 GPAMQ9HCL2 828 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 SNX15Q9NRS6 342 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 IMP3Q9NV31 184 aaKnown RBP15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 FAM186AA6NE01 2351 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 PIKFYVEQ9Y2I7 2098 aa15.26■□□□□ 0.03
PCDHGC3-204ENST00000617222 TP53BP1Q12888 1972 aaPredicted RBP15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 PRAMEF33A0A0G2JMD5 474 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 LDOC1O95751 146 aaPredicted RBP15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 VIPP01282 170 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 MPC1LP0DKB6 136 aa15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 MTHFD1P11586 935 aaKnown RBP15.25■□□□□ 0.03
PCDHGC3-204ENST00000617222 ENO3P13929 434 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms