RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 NINJ2Q9NZG7 142 aa14.61□□□□□ -0.07
UBXN1-218ENST00000616865 RAB21Q9UL25 225 aa14.61□□□□□ -0.07
UBXN1-218ENST00000616865 MAST4O15021 2626 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 ZCWPW2A0A1B0GU75 182 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 PRSS38A1L453 326 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 FADS2P1A8MWK0 482 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.6□□□□□ -0.07
UBXN1-218ENST00000616865 GOLGA8KD6RF30 607 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 GOLGA8TH3BQL2 631 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 ACSL3O95573 720 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 CPNE6O95741 557 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 ERVK-10P10266 1014 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 RALBP11234 206 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 TRIM23P36406 574 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 B4GALNT1Q00973 533 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 MGAT5Q09328 741 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 GTF2H3Q13889 308 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 TBR1Q16650 682 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 HSP90AA5PQ58FG0 334 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 LDLRAP1Q5SW96 308 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 EMBQ6PCB8 327 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 CERS6Q6ZMG9 384 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 RELL1Q8IUW5 271 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 PELI3Q8N2H9 469 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 UBLCP1Q8WVY7 318 aaPredicted RBP14.6□□□□□ -0.07
UBXN1-218ENST00000616865 CDKL2Q92772 493 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 VPS35Q96QK1 796 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 ZCCHC2Q9C0B9 1178 aaKnown RBP14.6□□□□□ -0.07
UBXN1-218ENST00000616865 B3GNT4Q9C0J1 378 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 SEMA6CQ9H3T2 930 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 RDH14Q9HBH5 336 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 IARS2Q9NSE4 1012 aaKnown RBP14.6□□□□□ -0.07
UBXN1-218ENST00000616865 IL1RAPL1Q9NZN1 696 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 ZFATQ9P243 1243 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 MOSPD1Q9UJG1 213 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 ZNF106Q9H2Y7 1883 aaKnown RBP14.6□□□□□ -0.07
UBXN1-218ENST00000616865 ARHGEF17Q96PE2 2063 aaPredicted RBP14.6□□□□□ -0.07
UBXN1-218ENST00000616865 UBR5O95071 2799 aaPredicted RBP14.6□□□□□ -0.07
UBXN1-218ENST00000616865 SDK2Q58EX2 2172 aa14.6□□□□□ -0.07
UBXN1-218ENST00000616865 CFAP99D6REC4 459 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 GAPDHSO14556 408 aaPredicted RBP14.59□□□□□ -0.07
UBXN1-218ENST00000616865 SUV39H1O43463 412 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 NDUFS3O75489 264 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 MYCLP1P12525 358 aaPredicted RBP14.59□□□□□ -0.07
UBXN1-218ENST00000616865 MSH3P20585 1137 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 FOXN2P32314 431 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 TTPAP49638 278 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 MAZP56270 477 aaKnown RBP14.59□□□□□ -0.07
UBXN1-218ENST00000616865 CYP4F2P78329 520 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 CDK3Q00526 305 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 FRG1Q14331 258 aaKnown RBP14.59□□□□□ -0.07
UBXN1-218ENST00000616865 NR1D2Q14995 579 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 BRD3Q15059 726 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 TMEM164Q5U3C3 297 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 ZNF470Q6ECI4 717 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 DOK6Q6PKX4 331 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 ZNF438Q7Z4V0 828 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 SERPINA9Q86WD7 417 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 C17orf82Q86X59 251 aaPredicted RBP14.59□□□□□ -0.07
UBXN1-218ENST00000616865 LMNTD2Q8IXW0 634 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 NXPE1Q8N323 547 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 HEXDCQ8WVB3 486 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 SGSM3Q96HU1 749 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 COPS8Q99627 209 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 TEX101Q9BY14 249 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 LRRC4CQ9HCJ2 640 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 ARFGAP3Q9NP61 516 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 ZDHHC3Q9NYG2 299 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 AKAP7Q9P0M2 348 aaPredicted RBP14.59□□□□□ -0.07
UBXN1-218ENST00000616865 TXNDC16Q9P2K2 825 aa14.59□□□□□ -0.07
UBXN1-218ENST00000616865 A0A087WUV0 522 aaPredicted RBP14.58□□□□□ -0.08
UBXN1-218ENST00000616865 F8W8V4 182 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 STMND1H3BQB6 276 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 GPR39O43194 453 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 CTIFO43310 598 aaKnown RBP14.58□□□□□ -0.08
UBXN1-218ENST00000616865 B4GAT1O43505 415 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 SOD1P00441 154 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 PRSS56P0CW18 603 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 OGNP20774 298 aaKnown RBP14.58□□□□□ -0.08
UBXN1-218ENST00000616865 ARCN1P48444 511 aaKnown RBP14.58□□□□□ -0.08
UBXN1-218ENST00000616865 CDKN1CP49918 316 aaPredicted RBP14.58□□□□□ -0.08
UBXN1-218ENST00000616865 GPX6P59796 221 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 CLPPQ16740 277 aaPredicted RBP14.58□□□□□ -0.08
UBXN1-218ENST00000616865 AMZ1Q400G9 498 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 GPRC6AQ5T6X5 926 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 RNF187Q5TA31 235 aaPredicted RBP14.58□□□□□ -0.08
UBXN1-218ENST00000616865 TRMT10BQ6PF06 316 aaKnown RBP14.58□□□□□ -0.08
UBXN1-218ENST00000616865 TRIM74Q86UV6 250 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 PIM3Q86V86 326 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 CTAGE3PQ8IX95 158 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 UNC5BQ8IZJ1 945 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 GPR150Q8NGU9 434 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 UHMK1Q8TAS1 419 aaKnown RBP14.58□□□□□ -0.08
UBXN1-218ENST00000616865 GPBAR1Q8TDU6 330 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 FBF1Q8TES7 1133 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 AENQ8WTP8 325 aaKnown RBP14.58□□□□□ -0.08
UBXN1-218ENST00000616865 ZDHHC1Q8WTX9 485 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 TCF12Q99081 682 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 NUDT22Q9BRQ3 303 aa14.58□□□□□ -0.08
UBXN1-218ENST00000616865 GSDMCQ9BYG8 508 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms