RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 TMTC4Q5T4D3 741 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 PRAMEF17Q5VTA0 474 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 ZNF517Q6ZMY9 492 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 CDKL3Q8IVW4 592 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 CARFQ8N187 725 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 OR4E2Q8NGC2 313 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 OR8K5Q8NH50 307 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 HM13Q8TCT9 377 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 THAP4Q8WY91 577 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 MR1Q95460 341 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 DCUN1D1Q96GG9 259 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 FAM118BQ9BPY3 351 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 TLR10Q9BXR5 811 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 FAM96AQ9H5X1 160 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 POMT2Q9UKY4 750 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 FARSAQ9Y285 508 aaKnown RBP20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 MED13Q9UHV7 2174 aa20.22■□□□□ 0.83
TRAPPC3-208ENST00000616074 USP9XQ93008 2570 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 UTP20O75691 2785 aaKnown RBP20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 KCNN4O15554 427 aa20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 PJA2O43164 708 aa20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 CRTAMO95727 393 aa20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 RALBP11234 206 aa20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 NDUFS1P28331 727 aa20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 CTNNA1P35221 906 aaKnown RBP20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 CHAF1BQ13112 559 aa20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 KRT33BQ14525 404 aa20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 PRPSAP1Q14558 356 aa20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 MICALCLQ6ZW33 695 aa20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 NXPE1Q8N323 547 aa20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 CCDC110Q8TBZ0 833 aa20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 ULK4Q96C45 1275 aa20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 FERMT1Q9BQL6 677 aa20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 CCM2Q9BSQ5 444 aa20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 CHST8Q9H2A9 424 aa20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 LATS2Q9NRM7 1088 aa20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 HEBP2Q9Y5Z4 205 aa20.21■□□□□ 0.83
TRAPPC3-208ENST00000616074 ARGFXA6NJG6 315 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 SLC9B1P1A6NJY1 282 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 CCL22O00626 93 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 RBP3P10745 1247 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 ITGALP20701 1170 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 CDH3P22223 829 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 EIF3EP60228 445 aaKnown RBP20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 ABRQ12979 859 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 PRKAA1Q13131 559 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 SPA17Q15506 151 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 IZUMO3Q5VZ72 239 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 DENND5AQ6IQ26 1287 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 LCN10Q6JVE6 187 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 SNX20Q7Z614 316 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 ATCAYQ86WG3 371 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 CCDC170Q8IYT3 715 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 FAM26EQ8N5C1 309 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 ACVR1CQ8NER5 493 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 COPS8Q99627 209 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 NRTNQ99748 197 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 TBL1YQ9BQ87 522 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 OSBPL8Q9BZF1 889 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 COG4Q9H9E3 785 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 EFR3BQ9Y2G0 817 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 PCDHA3Q9Y5H8 950 aa20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 USP9YO00507 2555 aaPredicted RBP20.2■□□□□ 0.82
TRAPPC3-208ENST00000616074 PIKFYVEQ9Y2I7 2098 aa20.19■□□□□ 0.82
TRAPPC3-208ENST00000616074 CFAP99D6REC4 459 aa20.19■□□□□ 0.82
TRAPPC3-208ENST00000616074 ATP1B2P14415 290 aaPredicted RBP20.19■□□□□ 0.82
TRAPPC3-208ENST00000616074 CTNNA2P26232 953 aa20.19■□□□□ 0.82
TRAPPC3-208ENST00000616074 PTPN7P35236 360 aa20.19■□□□□ 0.82
TRAPPC3-208ENST00000616074 SPARCL1Q14515 664 aa20.19■□□□□ 0.82
TRAPPC3-208ENST00000616074 PLEKHS1Q5SXH7 462 aa20.19■□□□□ 0.82
TRAPPC3-208ENST00000616074 DARS2Q6PI48 645 aaKnown RBP20.19■□□□□ 0.82
TRAPPC3-208ENST00000616074 DSELQ8IZU8 1212 aa20.19■□□□□ 0.82
TRAPPC3-208ENST00000616074 LCN9Q8WX39 176 aa20.19■□□□□ 0.82
TRAPPC3-208ENST00000616074 SPATA13Q96N96 652 aa20.19■□□□□ 0.82
TRAPPC3-208ENST00000616074 LRFN5Q96NI6 719 aa20.19■□□□□ 0.82
TRAPPC3-208ENST00000616074 FERD3LQ96RJ6 166 aa20.19■□□□□ 0.82
TRAPPC3-208ENST00000616074 OR52A5Q9H2C5 316 aa20.19■□□□□ 0.82
TRAPPC3-208ENST00000616074 SRMSQ9H3Y6 488 aa20.19■□□□□ 0.82
TRAPPC3-208ENST00000616074 FANCEQ9HB96 536 aa20.19■□□□□ 0.82
TRAPPC3-208ENST00000616074 C1GALT1Q9NS00 363 aa20.19■□□□□ 0.82
TRAPPC3-208ENST00000616074 C17orf113A0A1B0GUU1 675 aa20.18■□□□□ 0.82
TRAPPC3-208ENST00000616074 CCDC66A2RUB6 948 aa20.18■□□□□ 0.82
TRAPPC3-208ENST00000616074 GSAPA4D1B5 854 aa20.18■□□□□ 0.82
TRAPPC3-208ENST00000616074 RCCD1A6NED2 376 aa20.18■□□□□ 0.82
TRAPPC3-208ENST00000616074 MEN1O00255 615 aa20.18■□□□□ 0.82
TRAPPC3-208ENST00000616074 MATN2O00339 956 aa20.18■□□□□ 0.82
TRAPPC3-208ENST00000616074 BTN3A3O00478 584 aa20.18■□□□□ 0.82
TRAPPC3-208ENST00000616074 LDB2O43679 373 aa20.18■□□□□ 0.82
TRAPPC3-208ENST00000616074 STK10O94804 968 aaKnown RBP20.18■□□□□ 0.82
TRAPPC3-208ENST00000616074 KLK3P07288 261 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC3-208ENST00000616074 MC4RP32245 332 aa20.18■□□□□ 0.82
TRAPPC3-208ENST00000616074 CYLC1P35663 651 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC3-208ENST00000616074 HADHAP40939 763 aa20.18■□□□□ 0.82
TRAPPC3-208ENST00000616074 CDKN1CP49918 316 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC3-208ENST00000616074 GSDMDP57764 484 aa20.18■□□□□ 0.82
TRAPPC3-208ENST00000616074 ZNF658BQ4V348 819 aaPredicted RBP20.18■□□□□ 0.82
TRAPPC3-208ENST00000616074 AADACL2Q6P093 401 aa20.18■□□□□ 0.82
TRAPPC3-208ENST00000616074 ENDOVQ8N8Q3 282 aaKnown RBP20.18■□□□□ 0.82
TRAPPC3-208ENST00000616074 OR1L3Q8NH93 324 aa20.18■□□□□ 0.82
TRAPPC3-208ENST00000616074 ADAMTS17Q8TE56 1095 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms