RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 ADAMTSL2Q86TH1 951 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 SPATA16Q9BXB7 569 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 NUSAP1Q9BXS6 441 aaKnown RBP18.79■□□□□ 0.6
MMP28-204ENST00000615136 ABCD2Q9UBJ2 740 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 ITM2BQ9Y287 266 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 NDUFAF1Q9Y375 327 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 AP4S1Q9Y587 144 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 AP4B1Q9Y6B7 739 aa18.79■□□□□ 0.6
MMP28-204ENST00000615136 TCF20Q9UGU0 1960 aaKnown RBP18.78■□□□□ 0.6
MMP28-204ENST00000615136 IGLV3-16A0A075B6K0 115 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 ESRRBO95718 433 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 PRR35P0CG20 571 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 HLA-EP13747 358 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 DGKAP23743 735 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 VIPR1P32241 457 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 NNMTP40261 264 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 CLCN2P51788 898 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 NME5P56597 212 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 ERVPABLB-1P60509 514 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 CREB5Q02930 508 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 ARHGEF7Q14155 803 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 COQ5Q5HYK3 327 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 ZNF648Q5T619 568 aaPredicted RBP18.78■□□□□ 0.6
MMP28-204ENST00000615136 LAYNQ6UX15 382 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 MBOAT1Q6ZNC8 495 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 MYO1HQ8N1T3 1032 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 BPIFB1Q8TDL5 484 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 UHRF1Q96T88 793 aaPredicted RBP18.78■□□□□ 0.6
MMP28-204ENST00000615136 NOL11Q9H8H0 719 aaKnown RBP18.78■□□□□ 0.6
MMP28-204ENST00000615136 TMCO1Q9UM00 188 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 TSPAN11A1L157 253 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 UPK3BL1B0FP48 263 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 UPK3BL2E5RIL1 263 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 RFXAPO00287 272 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 NR5A2O00482 541 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 ADH1CP00326 375 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 CAPN3P20807 821 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 GDF5P43026 501 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 LIN52Q52LA3 116 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 LETMD1Q6P1Q0 360 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 PRMT9Q6P2P2 845 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 SERPINA13PQ6UXR4 307 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 GET4Q7L5D6 327 aaPredicted RBP18.78■□□□□ 0.6
MMP28-204ENST00000615136 TUBGCP3Q96CW5 907 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 ERLEC1Q96DZ1 483 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 CENPKQ9BS16 269 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 IGFLR1Q9H665 355 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 SLC24A3Q9HC58 644 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 MAP10Q9P2G4 905 aa18.78■□□□□ 0.6
MMP28-204ENST00000615136 PLXNA2O75051 1894 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 C16orf96A6NNT2 1141 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 C9JVG2 144 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 OR7A17O14581 309 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 HGFP14210 728 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 IDO1P14902 403 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 SLC7A1P30825 629 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 HSPA7P48741 367 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 RGS4P49798 205 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 GRIN2CQ14957 1233 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 EFL1Q7Z2Z2 1120 aaKnown RBP18.77■□□□□ 0.6
MMP28-204ENST00000615136 GOLGA7Q7Z5G4 137 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 CDYL2Q8N8U2 506 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 PDPRQ8NCN5 879 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 OR56A4Q8NGH8 313 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 OR2T11Q8NH01 316 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 SLCO4A1Q96BD0 722 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 HOPXQ9BPY8 73 aaPredicted RBP18.77■□□□□ 0.6
MMP28-204ENST00000615136 SLC39A3Q9BRY0 314 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 PBX4Q9BYU1 374 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 ZDHHC4Q9NPG8 344 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 SUN2Q9UH99 717 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 OARD1Q9Y530 152 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 COL4A3Q01955 1670 aa18.77■□□□□ 0.6
MMP28-204ENST00000615136 HEPACAM2A8MVW5 462 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 FADS2P1A8MWK0 482 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 H0YJX3 145 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 FXYD1O00168 92 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 CRCPO75575 148 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 MLYCDO95822 493 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 GRIA2P42262 883 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 MAGEA10P43363 369 aaPredicted RBP18.76■□□□□ 0.59
MMP28-204ENST00000615136 PCBP2Q15366 365 aaKnown RBP eCLIP18.76■□□□□ 0.59
MMP28-204ENST00000615136 ZNF805Q5CZA5 627 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 XKR7Q5GH72 579 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 PARS2Q7L3T8 475 aaKnown RBP18.76■□□□□ 0.59
MMP28-204ENST00000615136 VRK3Q8IV63 474 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 MINDY1Q8N5J2 469 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 SMARCD2Q92925 531 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 SAMD11Q96NU1 681 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 TMEM79Q9BSE2 394 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 FAM126AQ9BYI3 521 aaPredicted RBP18.76■□□□□ 0.59
MMP28-204ENST00000615136 NKX2-4Q9H2Z4 354 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 SLC52A3Q9NQ40 469 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 UBAP1Q9NZ09 502 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 PKD2L2Q9NZM6 624 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 PTBP2Q9UKA9 531 aaKnown RBP18.76■□□□□ 0.59
MMP28-204ENST00000615136 SLC27A6Q9Y2P4 619 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 A0A1W2PQ67 120 aa18.76■□□□□ 0.59
MMP28-204ENST00000615136 SRPRAP08240 638 aaKnown RBP18.76■□□□□ 0.59
MMP28-204ENST00000615136 SMIM18P0DKX4 95 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms