RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 BTBD3Q9Y2F9 522 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 WNT6Q9Y6F9 365 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 MYO5BQ9ULV0 1848 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 STX16-NPEPL1H3BU86 382 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 DNM1LO00429 736 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 STX16O14662 325 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 ZNF8P17098 575 aaPredicted RBP19.88■□□□□ 0.77
CTDP1-208ENST00000613122 SLC1A2P43004 574 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 KHKP50053 298 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 PUS10Q3MIT2 529 aaKnown RBP19.88■□□□□ 0.77
CTDP1-208ENST00000613122 CYP2U1Q7Z449 544 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 IRF7Q92985 503 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 RASSF1Q9NS23 344 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 INSL5Q9Y5Q6 135 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 PGRMC2O15173 223 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 VIPR1P32241 457 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 ZNF460Q14592 562 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 PHF19Q5T6S3 580 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 AAGABQ6PD74 315 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 AVL9Q8NBF6 648 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 PIGXQ8TBF5 258 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 COQ4Q9Y3A0 265 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 FMN2Q9NZ56 1722 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 TLX3O43711 291 aaPredicted RBP19.88■□□□□ 0.77
CTDP1-208ENST00000613122 HOXB2P14652 356 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 PCDH1Q08174 1060 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 PIK3R6Q5UE93 754 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 PDCD10Q9BUL8 212 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 C1orf109Q9NX04 203 aa19.88■□□□□ 0.77
CTDP1-208ENST00000613122 FADS2P1A8MWK0 482 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 LDOC1O95751 146 aaPredicted RBP19.87■□□□□ 0.77
CTDP1-208ENST00000613122 SCNN1AP37088 669 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 PDX1P52945 283 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 ARMCX6Q7L4S7 300 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 LRRTM4Q86VH4 590 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 OR2AP1Q8NGE2 309 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 POF1BQ8WVV4 589 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 C8orf48Q96LL4 319 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 C7orf26Q96N11 449 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 MINDY3Q9H8M7 445 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.87■□□□□ 0.77
CTDP1-208ENST00000613122 ENTPD5O75356 428 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 UNGP13051 313 aaPredicted RBP19.87■□□□□ 0.77
CTDP1-208ENST00000613122 NOL6Q9H6R4 1146 aaKnown RBP19.87■□□□□ 0.77
CTDP1-208ENST00000613122 NRG3P56975 720 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 ZCCHC12Q6PEW1 402 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 GSDMCQ9BYG8 508 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 NEMP2A6NFY4 417 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 MAGEB17A8MXT2 336 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 F2P00734 622 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 ATP5A1P25705 553 aaKnown RBP19.87■□□□□ 0.77
CTDP1-208ENST00000613122 FAM46DQ8NEK8 389 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 FAM81AQ8TBF8 368 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 ZBED6CLQ96FA7 236 aaPredicted RBP19.87■□□□□ 0.77
CTDP1-208ENST00000613122 NUSAP1Q9BXS6 441 aaKnown RBP19.87■□□□□ 0.77
CTDP1-208ENST00000613122 PHF11Q9UIL8 331 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 NFAT5O94916 1531 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 CCDC162PA2VCL2 907 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 SEC24AO95486 1093 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 ALPIP09923 528 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 KCNE1P15382 129 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 PTDSS1P48651 473 aaKnown RBP19.87■□□□□ 0.77
CTDP1-208ENST00000613122 Q6ZVU0 165 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 OR13C4Q8NGS5 318 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 ZNF516Q92618 1163 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 IRAK3Q9Y616 596 aa19.87■□□□□ 0.77
CTDP1-208ENST00000613122 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.86■□□□□ 0.77
CTDP1-208ENST00000613122 TIPRLO75663 272 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 SOD2P04179 222 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 HLA-DQB2P05538 268 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 SLC26A3P40879 764 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 CLCN7P51798 805 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 MTX3Q5HYI7 312 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 SLC8B1Q6J4K2 584 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 LRRC57Q8N9N7 239 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 ZNF483Q8TF39 744 aaPredicted RBP19.86■□□□□ 0.77
CTDP1-208ENST00000613122 TSEN15Q8WW01 171 aaKnown RBP19.86■□□□□ 0.77
CTDP1-208ENST00000613122 MCCC2Q9HCC0 563 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 PNO1Q9NRX1 252 aaKnown RBP19.86■□□□□ 0.77
CTDP1-208ENST00000613122 YTHDF3Q7Z739 585 aaKnown RBP19.86■□□□□ 0.77
CTDP1-208ENST00000613122 GALNT5Q7Z7M9 940 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 NIPA2Q8N8Q9 360 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 RNF31Q96EP0 1072 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 GPC6Q9Y625 555 aaPredicted RBP19.86■□□□□ 0.77
CTDP1-208ENST00000613122 ZBTB22O15209 634 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 CHRNA4P43681 627 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 KCNJ2P63252 427 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 UAP1L1Q3KQV9 507 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 NUP54Q7Z3B4 507 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 SMPDL3BQ92485 455 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 HBEGFQ99075 208 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 CCM2Q9BSQ5 444 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 ABCC6O95255 1503 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 CHST10O43529 356 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 ARRB1P49407 418 aaPredicted RBP19.86■□□□□ 0.77
CTDP1-208ENST00000613122 GPR17Q13304 367 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 REP15Q6BDI9 236 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 SLC30A6Q6NXT4 461 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 GPR151Q8TDV0 419 aa19.86■□□□□ 0.77
CTDP1-208ENST00000613122 CNTN6Q9UQ52 1028 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms