RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 SH2D4BQ5SQS7 431 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 ZNF648Q5T619 568 aaPredicted RBP8.75□□□□□ -1.01
CCDC47-207ENST00000612558 METTL21CQ5VZV1 264 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 FAM91A1Q658Y4 838 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 ALYREFQ86V81 257 aaKnown RBP8.75□□□□□ -1.01
CCDC47-207ENST00000612558 TMPRSS6Q8IU80 811 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 RASGEF1AQ8N9B8 481 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 ASZ1Q8WWH4 475 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 ELMO1Q92556 727 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 FAM131CQ96AQ9 280 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 TUBB6Q9BUF5 446 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 MKRN2Q9H000 416 aaKnown RBP8.75□□□□□ -1.01
CCDC47-207ENST00000612558 RDH14Q9HBH5 336 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 SAR1AQ9NR31 198 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 TXLNGQ9NUQ3 528 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 FBXL12Q9NXK8 326 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 SCML1Q9UN30 329 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 OARD1Q9Y530 152 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 TNPO3Q9Y5L0 923 aaKnown RBP8.75□□□□□ -1.01
CCDC47-207ENST00000612558 COL4A2P08572 1712 aa8.75□□□□□ -1.01
CCDC47-207ENST00000612558 A0A1W2PQF6 199 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 IGLON5A6NGN9 336 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 LRRC14BA6NHZ5 514 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 OR2AG2A6NM03 316 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 TRPC5OSA6NMA1 111 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 K7ESM1 405 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 UBFD1O14562 309 aaKnown RBP8.74□□□□□ -1.01
CCDC47-207ENST00000612558 ATG13O75143 517 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 GPC4O75487 556 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 CDK14O94921 469 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 ASGR2P07307 311 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 C8GP07360 202 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 FGF4P08620 206 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 RPS17P08708 135 aaKnown RBP8.74□□□□□ -1.01
CCDC47-207ENST00000612558 VCLP18206 1134 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 PRLHRP49683 370 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 CDH13P55290 713 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 RELBQ01201 579 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 MLLT1Q03111 559 aaPredicted RBP8.74□□□□□ -1.01
CCDC47-207ENST00000612558 CLCQ05315 142 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 ACTN3Q08043 901 aaPredicted RBP8.74□□□□□ -1.01
CCDC47-207ENST00000612558 PCBP2Q15366 365 aaKnown RBP eCLIP8.74□□□□□ -1.01
CCDC47-207ENST00000612558 PPP1R3AQ16821 1122 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 SLC44A4Q53GD3 710 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 CDKL4Q5MAI5 379 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 VWA5B1Q5TIE3 1220 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 PNCKQ6P2M8 343 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 TMEM220Q6QAJ8 160 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 ADAMTSL4Q6UY14 1074 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 NEK10Q6ZWH5 1172 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 RPS27LQ71UM5 84 aaKnown RBP8.74□□□□□ -1.01
CCDC47-207ENST00000612558 CACUL1Q86Y37 369 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 CLYBLQ8N0X4 340 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 PELI3Q8N2H9 469 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 PDPRQ8NCN5 879 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 MAPK15Q8TD08 544 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 GANCQ8TET4 914 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 CDX2Q99626 313 aaPredicted RBP8.74□□□□□ -1.01
CCDC47-207ENST00000612558 CCM2Q9BSQ5 444 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 NUF2Q9BZD4 464 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 NMUR2Q9GZQ4 415 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 TRIM39Q9HCM9 518 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 CD248Q9HCU0 757 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 TCF7L2Q9NQB0 619 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 SLC2A4RGQ9NR83 387 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 UTP6Q9NYH9 597 aaKnown RBP8.74□□□□□ -1.01
CCDC47-207ENST00000612558 SERGEFQ9UGK8 458 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 ADAMTS6Q9UKP5 1117 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 TRAF6Q9Y4K3 522 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 NUMA1Q14980 2115 aa8.74□□□□□ -1.01
CCDC47-207ENST00000612558 SLC16A5O15375 505 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 PLRG1O43660 514 aaKnown RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 NARSO43776 548 aaKnown RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 VEGFDO43915 354 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 SLCO2B1O94956 709 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 UNC5CO95185 931 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 MLYCDO95822 493 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 ENO2P09104 434 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 GSTM1P09488 218 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 SRFP11831 508 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 RASSF2P50749 326 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 CTSCP53634 463 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 RPS21P63220 83 aaKnown RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 GSTM4Q03013 218 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 SFSWAPQ12872 951 aaKnown RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 LCP2Q13094 533 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 SP140Q13342 867 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 TDGQ13569 410 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 GTF2H3Q13889 308 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 BOP1Q14137 746 aaKnown RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 KRT72Q14CN4 511 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 TBCCQ15814 346 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 PHKG1Q16816 387 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 LEXMQ3ZCV2 418 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 BCL7AQ4VC05 210 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 SLC9B1Q4ZJI4 515 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 EOGTQ5NDL2 527 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 SULT1C3Q6IMI6 304 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 METTL2BQ6P1Q9 378 aaKnown RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 ACAD11Q709F0 780 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms