RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 INSM2Q96T92 566 aaPredicted RBP12.04□□□□□ -0.48
CBWD3-208ENST00000612050 SRMSQ9H3Y6 488 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 ZNF768Q9H5H4 540 aaKnown RBP12.04□□□□□ -0.48
CBWD3-208ENST00000612050 KIR3DX1Q9H7L2 352 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 MRM3Q9HC36 420 aaKnown RBP12.04□□□□□ -0.48
CBWD3-208ENST00000612050 XAB2Q9HCS7 855 aaKnown RBP12.04□□□□□ -0.48
CBWD3-208ENST00000612050 PDE7BQ9NP56 450 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 FBXO8Q9NRD0 319 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 CHRAC1Q9NRG0 131 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 HRASLS2Q9NWW9 162 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 EPHA6Q9UF33 1036 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 GNPTGQ9UJJ9 305 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 VPS9D1Q9Y2B5 631 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 MRFAP1Q9Y605 127 aa12.04□□□□□ -0.48
CBWD3-208ENST00000612050 KMT2BQ9UMN6 2715 aaPredicted RBP12.04□□□□□ -0.48
CBWD3-208ENST00000612050 OR51F1A6NGY5 319 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 C9orf172C9J069 976 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 CD3EAPO15446 510 aaKnown RBP12.03□□□□□ -0.48
CBWD3-208ENST00000612050 MGAT1P26572 445 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 CA5AP35218 305 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 SEPHS1P49903 392 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 ARSDP51689 593 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 GFERP55789 205 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 RHDQ02161 417 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 CFHR1Q03591 330 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 ACVR1Q04771 509 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 CLN3Q13286 438 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 IL11RAQ14626 422 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 CYP1B1Q16678 543 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 ARHGAP40Q5TG30 622 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 ANKS6Q68DC2 871 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 TTC23LQ6PF05 361 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 FAM92BQ6ZTR7 304 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 PRSS42Q7Z5A4 293 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 LRRC6Q86X45 466 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 RASGRP3Q8IV61 690 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 PIANPQ8IYJ0 282 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 SIDT2Q8NBJ9 832 aaKnown RBP12.03□□□□□ -0.48
CBWD3-208ENST00000612050 GPR150Q8NGU9 434 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 ASZ1Q8WWH4 475 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 RSC1A1Q92681 617 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 TFGQ92734 400 aaPredicted RBP12.03□□□□□ -0.48
CBWD3-208ENST00000612050 FANCEQ9HB96 536 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 OCIAD1Q9NX40 245 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 ASIC3Q9UHC3 531 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 POLG2Q9UHN1 485 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 SLC24A2Q9UI40 661 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 ASF1AQ9Y294 204 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 APC2O95996 2303 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 GSAPA4D1B5 854 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 CTAGE9A4FU28 777 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 OR5K3A6NET4 321 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 TLCD2A6NGC4 264 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.03□□□□□ -0.48
CBWD3-208ENST00000612050 PRMT5O14744 637 aaPredicted RBP12.03□□□□□ -0.48
CBWD3-208ENST00000612050 MLNP12872 115 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 ACY1Q03154 408 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 THOC5Q13769 683 aaKnown RBP12.03□□□□□ -0.48
CBWD3-208ENST00000612050 TAF1BQ53T94 588 aaPredicted RBP12.03□□□□□ -0.48
CBWD3-208ENST00000612050 CAPRIN2Q6IMN6 1127 aaKnown RBP12.03□□□□□ -0.48
CBWD3-208ENST00000612050 BPHLQ86WA6 291 aaPredicted RBP12.03□□□□□ -0.48
CBWD3-208ENST00000612050 ZFAND4Q86XD8 727 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 RAB42Q8N4Z0 105 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 RMDN2Q96LZ7 410 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 NAPGQ99747 312 aaPredicted RBP12.03□□□□□ -0.48
CBWD3-208ENST00000612050 KCNF1Q9H3M0 494 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 PRORYQ9H606 182 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 SOHLH2Q9NX45 425 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 FOXJ2Q9P0K8 574 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 SLC2A6Q9UGQ3 507 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 B3GALT1Q9Y5Z6 326 aa12.03□□□□□ -0.48
CBWD3-208ENST00000612050 OR6C74A6NCV1 312 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 SDR42E2A6NKP2 422 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 H3BMM5 538 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 NDC80O14777 642 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 SGTAO43765 313 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 MT-ND3P03897 115 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 PRSS56P0CW18 603 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 CDH3P22223 829 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 MAP4P27816 1152 aaKnown RBP12.02□□□□□ -0.49
CBWD3-208ENST00000612050 SHMT2P34897 504 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 LEPRP48357 1165 aaKnown RBP12.02□□□□□ -0.49
CBWD3-208ENST00000612050 CRADDP78560 199 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 BRD3Q15059 726 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 DUS1LQ6P1R4 473 aaKnown RBP12.02□□□□□ -0.49
CBWD3-208ENST00000612050 PPP1R3BQ86XI6 285 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 PPIL6Q8IXY8 311 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 CACNA2D3Q8IZS8 1091 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 NLGN4XQ8N0W4 816 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 NLGN4YQ8NFZ3 816 aaPredicted RBP12.02□□□□□ -0.49
CBWD3-208ENST00000612050 OR4E2Q8NGC2 313 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 NAT14Q8WUY8 206 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 STAMBPL1Q96FJ0 436 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 PDLIM2Q96JY6 352 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 FOPNLQ96NB1 174 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 OR6C1Q96RD1 312 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 TCF12Q99081 682 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 KIFC1Q9BW19 673 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 CARD6Q9BX69 1037 aa12.02□□□□□ -0.49
CBWD3-208ENST00000612050 CCDC68Q9H2F9 335 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms