RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 THRBP10828 461 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 GJA1P17302 382 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 SLC6A4P31645 630 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 CDH15P55291 814 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 NAE1Q13564 534 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 SIM2Q14190 667 aaPredicted RBP6.27□□□□□ -1.41
SNX13-213ENST00000611725 PPP4R4Q6NUP7 873 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 TMEM26Q6ZUK4 368 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 NECAB2Q7Z6G3 386 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 TMEM199Q8N511 208 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 CD200R1Q8TD46 325 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 SNRNP27Q8WVK2 155 aaKnown RBP6.27□□□□□ -1.41
SNX13-213ENST00000611725 FATE1Q969F0 183 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 ZUFSPQ96AP4 578 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 BIRC7Q96CA5 298 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 MED8Q96G25 268 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 KLHL32Q96NJ5 620 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 PAIP1Q9H074 479 aaKnown RBP6.27□□□□□ -1.41
SNX13-213ENST00000611725 RIBC2Q9H4K1 309 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 ABCB8Q9NUT2 735 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 FBP2O00757 339 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 ACOT8O14734 319 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 GRM6O15303 877 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 GPR39O43194 453 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 MTX2O75431 263 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 BCL10O95999 233 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 FTH1P02794 183 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 PGRP06401 933 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 RAP2AP10114 183 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 PBLDP30039 288 aaPredicted RBP6.27□□□□□ -1.41
SNX13-213ENST00000611725 NFKB2Q00653 900 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 ABRQ12979 859 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 TYSND1Q2T9J0 566 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 SPDYE7PQ495Y7 208 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 FAM43BQ6ZT52 329 aaPredicted RBP6.27□□□□□ -1.41
SNX13-213ENST00000611725 Q6ZVL8 140 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 ZBTB46Q86UZ6 589 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 CSGALNACT1Q8TDX6 532 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 AP2M1Q96CW1 435 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 REEP1Q9H902 201 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 IMPAD1Q9NX62 359 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 CMTM6Q9NX76 183 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 SLCO3A1Q9UIG8 710 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 A0A0U1RQS6 177 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 NEDD8-MDP1E9PL57 170 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 PRKD3O94806 890 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 IFNA14P01570 189 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 BMP2P12643 396 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 ARSAP15289 507 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 ATF6P18850 670 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 CDKN1CP49918 316 aaPredicted RBP6.27□□□□□ -1.41
SNX13-213ENST00000611725 OR4D2P58180 307 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 ACVR1Q04771 509 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 CAMK2GQ13555 558 aaPredicted RBP6.27□□□□□ -1.41
SNX13-213ENST00000611725 DPY19L1Q2PZI1 675 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 TCAIMQ8N3R3 496 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 SH3RF2Q8TEC5 729 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 GORASP1Q9BQQ3 440 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 TTLL2Q9BWV7 592 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 CACYBPQ9HB71 228 aaKnown RBP6.27□□□□□ -1.41
SNX13-213ENST00000611725 ADPRHL2Q9NX46 363 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 ETAA1Q9NY74 926 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 FAM92AA1XBS5 289 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 CXCL14O95715 111 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 CREMQ03060 361 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 DAG1Q14118 895 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 KRT33BQ14525 404 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 SETMARQ53H47 684 aaPredicted RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 GPR107Q5VW38 600 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 ZNF783Q6ZMS7 281 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 ARHGAP22Q7Z5H3 698 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 CHCHD4Q8N4Q1 142 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 TERB1Q8NA31 727 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 BPIFB6Q8NFQ5 453 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 DGCR6LQ9BY27 220 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 SLC29A3Q9BZD2 475 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 ZNF556Q9HAH1 456 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 IL26Q9NPH9 171 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 RAD18Q9NS91 495 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 TBC1D14Q9P2M4 693 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 TPRKBQ9Y3C4 175 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 MRPS23Q9Y3D9 190 aaKnown RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 OAS3Q9Y6K5 1087 aaKnown RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 LOC730098B7Z3J9 87 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 PGLSO95336 258 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 CLIC3O95833 236 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 PEX11BO96011 259 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 PABPC1P11940 636 aaKnown RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 GPX3P22352 226 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 PSMB9P28065 219 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 GKP32189 559 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 SOAT1P35610 550 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 PPP1R8Q12972 351 aaKnown RBP6.26□□□□□ -1.41
SNX13-213ENST00000611725 DGCR6Q14129 220 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 DMC1Q14565 340 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 ACOX1Q15067 660 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 SLC14A2Q15849 920 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 POM121L1PQ3SYA9 428 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 FAM26DQ5JW98 314 aa6.26□□□□□ -1.41
SNX13-213ENST00000611725 NADSYN1Q6IA69 706 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms