RNA–Protein interactions for RNA: ENST00000610488.4

PPHLN1-223, Transcript of periphilin 1, human

TSL 5 BASIC

Gene PPHLN1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-223	ENST00000610488	TAS2R42	Q7RTR8	314 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	CLEC14A	Q86T13	490 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	FAM45A	Q8TCE6	357 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	SCG3	Q8WXD2	468 aa	Known RBP	13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	ZNF75CP	Q92670	426 aa	Predicted RBP	13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	13.34	□□□□□ -0.27	2e-6	■■■■■ 54.9
PPHLN1-223	ENST00000610488	TCF12	Q99081	682 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	C19orf43	Q9BQ61	176 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	MECR	Q9BV79	373 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	TCEAL2	Q9H3H9	227 aa	Predicted RBP	13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	MANSC1	Q9H8J5	431 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	FGFR1OP2	Q9NVK5	253 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	B4GALT6	Q9UBX8	382 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	COQ6	Q9Y2Z9	468 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	ACOT9	Q9Y305	439 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	VWA7	Q9Y334	891 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488		U3KQA8	63 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488		A0A087X1B8	175 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	ERICH4	A6NGS2	130 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	AREL1	O15033	823 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	CS	O75390	466 aa	Known RBP	13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	SRP72	O76094	671 aa	Known RBP	13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	PROC	P04070	461 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	GP1BA	P07359	652 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	TIMP2	P16035	220 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	BPI	P17213	487 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	BGN	P21810	368 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	LHCGR	P22888	699 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	NFKBIA	P25963	317 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	SPAM1	P38567	509 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	TTPA	P49638	278 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	GABRE	P78334	506 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	ARHGEF7	Q14155	803 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	IRF4	Q15306	451 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	TCEA2	Q15560	299 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	CCDC153	Q494R4	210 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	PRRT3	Q5FWE3	981 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	RNF187	Q5TA31	235 aa	Predicted RBP	13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	GUSBP11	Q6P575	273 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	ZNF549	Q6P9A3	640 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	FAM47E	Q6ZV65	393 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	EFL1	Q7Z2Z2	1120 aa	Known RBP	13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	NUDCD3	Q8IVD9	361 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	PIANP	Q8IYJ0	282 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	PHACTR4	Q8IZ21	702 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	CACTIN-AS1	Q8N1I8	211 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	FAM181A	Q8N9Y4	354 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	KCTD4	Q8WVF5	259 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	BTN2A2	Q8WVV5	523 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	ASB12	Q8WXK4	309 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	LPGAT1	Q92604	370 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	FGF11	Q92914	225 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	NAF1	Q96HR8	494 aa	Known RBP	13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	BBC3	Q96PG8	261 aa	Predicted RBP	13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	SYNDIG1	Q9H7V2	258 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	MBNL1	Q9NR56	388 aa	Known RBP	13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	SPAST	Q9UBP0	616 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	DKK3	Q9UBP4	350 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	APPL1	Q9UKG1	709 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	RUVBL2	Q9Y230	463 aa	Known RBP	13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	VPS9D1	Q9Y2B5	631 aa		13.34	□□□□□ -0.27
PPHLN1-223	ENST00000610488	GLYATL1P3	A0A0U1RQE8	302 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	GPR39	O43194	453 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	DNAJC6	O75061	913 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	PRAMEF1	O95521	474 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	BPGM	P07738	259 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	COL6A2	P12110	1019 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	ITGAL	P20701	1170 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	FMO4	P31512	558 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	VIPR1	P32241	457 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	CDKN2D	P55273	166 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	PTS	Q03393	145 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	ELP6	Q0PNE2	266 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	NR0B2	Q15466	257 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	TBC1D25	Q3MII6	688 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	CDCP2	Q5VXM1	449 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	TBC1D1	Q86TI0	1168 aa	Predicted RBP	13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	LCA5	Q86VQ0	697 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	TRIM42	Q8IWZ5	723 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	CENPL	Q8N0S6	344 aa	Predicted RBP	13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	CBARP	Q8N350	705 aa	Predicted RBP	13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	TP53I13	Q8NBR0	393 aa	Predicted RBP	13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	SNIP1	Q8TAD8	396 aa	Known RBP	13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	HCAR2	Q8TDS4	363 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	AARSD1	Q9BTE6	412 aa	Known RBP	13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	LRRC61	Q9BV99	259 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	CCDC68	Q9H2F9	335 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	ASB8	Q9H765	288 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	NMRAL1	Q9HBL8	299 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	PCDH12	Q9NPG4	1184 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	IL26	Q9NPH9	171 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	DOLK	Q9UPQ8	538 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	CSNK1G3	Q9Y6M4	447 aa		13.33	□□□□□ -0.28
PPHLN1-223	ENST00000610488	GAPDHS	O14556	408 aa	Predicted RBP	13.32	□□□□□ -0.28
PPHLN1-223	ENST00000610488	BIRC5	O15392	142 aa		13.32	□□□□□ -0.28
PPHLN1-223	ENST00000610488	KLHL2	O95198	593 aa		13.32	□□□□□ -0.28
PPHLN1-223	ENST00000610488	ANXA6	P08133	673 aa		13.32	□□□□□ -0.28
PPHLN1-223	ENST00000610488	ZNF30	P17039	623 aa		13.32	□□□□□ -0.28
PPHLN1-223	ENST00000610488	FDXR	P22570	491 aa		13.32	□□□□□ -0.28
PPHLN1-223	ENST00000610488	CHRNA6	Q15825	494 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms