RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 MICU2Q8IYU8 434 aa22.01■■□□□ 1.11
SHANK2-220ENST00000608988 NMUR1Q9HB89 426 aa22.01■■□□□ 1.11
SHANK2-220ENST00000608988 DCAF13Q9NV06 445 aaKnown RBP22.01■■□□□ 1.11
SHANK2-220ENST00000608988 PAK1IP1Q9NWT1 392 aaPredicted RBP22.01■■□□□ 1.11
SHANK2-220ENST00000608988 SCN3BQ9NY72 215 aa22.01■■□□□ 1.11
SHANK2-220ENST00000608988 EIF2B4Q9UI10 523 aaKnown RBP22.01■■□□□ 1.11
SHANK2-220ENST00000608988 SCML2Q9UQR0 700 aa22.01■■□□□ 1.11
SHANK2-220ENST00000608988 DOCK4Q8N1I0 1966 aa22.01■■□□□ 1.11
SHANK2-220ENST00000608988 FAM220BPB1ANY3 271 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 ENPP3O14638 875 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 NOBOXO60393 691 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 BMP4P12644 408 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 S100A1P23297 94 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 CD40LGP29965 261 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 MAPKAPK2P49137 400 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 HUNKP57058 714 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 NR6A1Q15406 480 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 TAF1AQ15573 450 aaPredicted RBP22■■□□□ 1.11
SHANK2-220ENST00000608988 LRRTM3Q86VH5 581 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 METTL6Q8TCB7 284 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 MCOLN3Q8TDD5 553 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 TRIB2Q92519 343 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 RHBDF1Q96CC6 855 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 ZNF300Q96RE9 604 aaPredicted RBP22■■□□□ 1.11
SHANK2-220ENST00000608988 TRIB3Q96RU7 358 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 KATNAL1Q9BW62 490 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 THG1LQ9NWX6 298 aaKnown RBP22■■□□□ 1.11
SHANK2-220ENST00000608988 ASIC5Q9NY37 505 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 DNMT3BQ9UBC3 853 aaKnown RBP22■■□□□ 1.11
SHANK2-220ENST00000608988 EIF3LQ9Y262 564 aaKnown RBP22■■□□□ 1.11
SHANK2-220ENST00000608988 TSC22D4Q9Y3Q8 395 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 CASTOR2A6NHX0 329 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 MEIS3P2A8K0S8 358 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 ANGPTL1O95841 491 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 IL6P05231 212 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 GSTT2P0CG29 244 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 GSTT2BP0CG30 244 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 PABPC1P11940 636 aaKnown RBP22■■□□□ 1.11
SHANK2-220ENST00000608988 HOXC8P31273 242 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 CLCN4P51793 760 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 FADDQ13158 208 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 NDUFA5Q16718 116 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 ADPRMQ3LIE5 342 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 ALFQ53S48 1182 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 OVOS1Q6IE37 1185 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 IL27RAQ6UWB1 636 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 MRPL10Q7Z7H8 261 aaKnown RBP22■■□□□ 1.11
SHANK2-220ENST00000608988 FAM86B1Q8N7N1 296 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 OR10T2Q8NGX3 314 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 GTF2H4Q92759 462 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 CEP295NLQ96MC4 621 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 ASPSCR1Q9BZE9 553 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 CCDC90BQ9GZT6 254 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 VAPAQ9P0L0 249 aa22■■□□□ 1.11
SHANK2-220ENST00000608988 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22■■□□□ 1.11
SHANK2-220ENST00000608988 PTGES3LE9PB15 166 aa21.99■■□□□ 1.11
SHANK2-220ENST00000608988 DFNA5O60443 496 aa21.99■■□□□ 1.11
SHANK2-220ENST00000608988 TYMPP19971 482 aa21.99■■□□□ 1.11
SHANK2-220ENST00000608988 TTPAP49638 278 aa21.99■■□□□ 1.11
SHANK2-220ENST00000608988 ST13P50502 369 aaKnown RBP21.99■■□□□ 1.11
SHANK2-220ENST00000608988 SCNN1GP51170 649 aa21.99■■□□□ 1.11
SHANK2-220ENST00000608988 HK3P52790 923 aa21.99■■□□□ 1.11
SHANK2-220ENST00000608988 PPP5CP53041 499 aa21.99■■□□□ 1.11
SHANK2-220ENST00000608988 IFITM3Q01628 133 aa21.99■■□□□ 1.11
SHANK2-220ENST00000608988 PTPRCAPQ14761 206 aa21.99■■□□□ 1.11
SHANK2-220ENST00000608988 PTPRNQ16849 979 aa21.99■■□□□ 1.11
SHANK2-220ENST00000608988 SHQ1Q6PI26 577 aaKnown RBP21.99■■□□□ 1.11
SHANK2-220ENST00000608988 CCDC80Q76M96 950 aa21.99■■□□□ 1.11
SHANK2-220ENST00000608988 HPS1Q92902 700 aa21.99■■□□□ 1.11
SHANK2-220ENST00000608988 GLMNQ92990 594 aa21.99■■□□□ 1.11
SHANK2-220ENST00000608988 THUMPD3Q9BV44 507 aaKnown RBP21.99■■□□□ 1.11
SHANK2-220ENST00000608988 SPC25Q9HBM1 224 aa21.99■■□□□ 1.11
SHANK2-220ENST00000608988 TMEFF2Q9UIK5 374 aaPredicted RBP21.99■■□□□ 1.11
SHANK2-220ENST00000608988 SAGE2PA6NJ88 616 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 OTCP00480 354 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 CAPN1P07384 714 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 PGFP49763 221 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 PIGFQ07326 219 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 GALNT3Q14435 633 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 PHKG1Q16816 387 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 AP5B1Q2VPB7 878 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 RUNDC3AQ59EK9 446 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 CAPN13Q6MZZ7 669 aaPredicted RBP21.98■■□□□ 1.11
SHANK2-220ENST00000608988 LETMD1Q6P1Q0 360 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 KCNJ9Q92806 393 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 PDLIM5Q96HC4 596 aaKnown RBP21.98■■□□□ 1.11
SHANK2-220ENST00000608988 UROC1Q96N76 676 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 KLHL25Q9H0H3 589 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 ERVK-11Q9UQG0 969 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 POLR3HQ9Y535 204 aaPredicted RBP21.98■■□□□ 1.11
SHANK2-220ENST00000608988 MYO16Q9Y6X6 1858 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 NCF1BA6NI72 391 aaPredicted RBP21.98■■□□□ 1.11
SHANK2-220ENST00000608988 NCF1CA8MVU1 366 aaPredicted RBP21.98■■□□□ 1.11
SHANK2-220ENST00000608988 M0QZ92 97 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 NCF1P14598 390 aaPredicted RBP21.98■■□□□ 1.11
SHANK2-220ENST00000608988 PCSK2P16519 638 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 DGKQP52824 942 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 IST1P53990 364 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 SLC35A2P78381 396 aa21.98■■□□□ 1.11
SHANK2-220ENST00000608988 PON2Q15165 354 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms