RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 TUBB3Q13509 450 aa12.9□□□□□ -0.34
TOM1-218ENST00000608674 TMTC4Q5T4D3 741 aa12.9□□□□□ -0.34
TOM1-218ENST00000608674 CAPRIN2Q6IMN6 1127 aaKnown RBP12.9□□□□□ -0.34
TOM1-218ENST00000608674 KMT5CQ86Y97 462 aa12.9□□□□□ -0.34
TOM1-218ENST00000608674 SLC13A5Q86YT5 568 aaPredicted RBP12.9□□□□□ -0.34
TOM1-218ENST00000608674 LILRA3Q8N6C8 439 aaPredicted RBP12.9□□□□□ -0.34
TOM1-218ENST00000608674 CCDC89Q8N998 374 aa12.9□□□□□ -0.34
TOM1-218ENST00000608674 GALNT6Q8NCL4 622 aa12.9□□□□□ -0.34
TOM1-218ENST00000608674 OR4E2Q8NGC2 313 aa12.9□□□□□ -0.34
TOM1-218ENST00000608674 OR52K1Q8NGK4 314 aa12.9□□□□□ -0.34
TOM1-218ENST00000608674 C1orf54Q8WWF1 131 aa12.9□□□□□ -0.34
TOM1-218ENST00000608674 LCN9Q8WX39 176 aa12.9□□□□□ -0.34
TOM1-218ENST00000608674 STARD8Q92502 1023 aa12.9□□□□□ -0.34
TOM1-218ENST00000608674 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.9□□□□□ -0.34
TOM1-218ENST00000608674 SLC41A2Q96JW4 573 aa12.9□□□□□ -0.34
TOM1-218ENST00000608674 FERD3LQ96RJ6 166 aa12.9□□□□□ -0.34
TOM1-218ENST00000608674 TTC1Q99614 292 aa12.9□□□□□ -0.34
TOM1-218ENST00000608674 SMARCAL1Q9NZC9 954 aa12.9□□□□□ -0.34
TOM1-218ENST00000608674 SEMA5BQ9P283 1151 aa12.9□□□□□ -0.34
TOM1-218ENST00000608674 IL17BQ9UHF5 180 aa12.9□□□□□ -0.34
TOM1-218ENST00000608674 PCDHB3Q9Y5E6 796 aa12.9□□□□□ -0.34
TOM1-218ENST00000608674 IGLV3-16A0A075B6K0 115 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 HEATR9A2RTY3 570 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 MROH6A6NGR9 719 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 SLC28A2O43868 658 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 AP2A2O94973 939 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 MT-ND3P03897 115 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 GSTM1P09488 218 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 FOLR1P15328 257 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 ZNF28P17035 718 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 TCN2P20062 427 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 MSNP26038 577 aaKnown RBP12.89□□□□□ -0.35
TOM1-218ENST00000608674 HSD11B2P80365 405 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 GSTM4Q03013 218 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 CDC20Q12834 499 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 RPA4Q13156 261 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 SNX1Q13596 522 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 KCNAB1Q14722 419 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 OASLQ15646 514 aaKnown RBP12.89□□□□□ -0.35
TOM1-218ENST00000608674 DBN1Q16643 649 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 CCDC38Q502W7 563 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 C16orf46Q6P387 395 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 PRICKLE2Q7Z3G6 844 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 BPHLQ86WA6 291 aaPredicted RBP12.89□□□□□ -0.35
TOM1-218ENST00000608674 PIANPQ8IYJ0 282 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 CLDN19Q8N6F1 224 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 ACVR1CQ8NER5 493 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 FCRL4Q96PJ5 515 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 ADNPQ9H2P0 1102 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 SRMSQ9H3Y6 488 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 COG4Q9H9E3 785 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 ETNK1Q9HBU6 452 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 GEMIN8Q9NWZ8 242 aaKnown RBP12.89□□□□□ -0.35
TOM1-218ENST00000608674 SOHLH2Q9NX45 425 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 CROTQ9UKG9 612 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 PADI1Q9ULC6 663 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 TENM4Q6N022 2769 aa12.89□□□□□ -0.35
TOM1-218ENST00000608674 GSAPA4D1B5 854 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 F8W8V4 182 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 MATN2O00339 956 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 QSOX1O00391 747 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 MAP3K7O43318 606 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 KATNA1O75449 491 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 ZBTB11O95625 1053 aaPredicted RBP12.88□□□□□ -0.35
TOM1-218ENST00000608674 EBLN1P0CF75 366 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 PRSS56P0CW18 603 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 POLR2CP19387 275 aaPredicted RBP12.88□□□□□ -0.35
TOM1-218ENST00000608674 DLSTP36957 453 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 NSG1P42857 185 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 ARCN1P48444 511 aaKnown RBP12.88□□□□□ -0.35
TOM1-218ENST00000608674 CD151P48509 253 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 DEFB109BQ30KR1 87 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 MEI1Q5TIA1 1274 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 LYPLAL1Q5VWZ2 237 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 CARFQ8N187 725 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 SLC25A18Q9H1K4 315 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 OR52A5Q9H2C5 316 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 MVB12BQ9H7P6 319 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 LZTFL1Q9NQ48 299 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 RAB6BQ9NRW1 208 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 FGF21Q9NSA1 209 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 STARD5Q9NSY2 213 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 KCND3Q9UK17 655 aa12.88□□□□□ -0.35
TOM1-218ENST00000608674 SETXQ7Z333 2677 aaKnown RBP12.88□□□□□ -0.35
TOM1-218ENST00000608674 LIN7AO14910 233 aaPredicted RBP12.87□□□□□ -0.35
TOM1-218ENST00000608674 NRDCO43847 1150 aa12.87□□□□□ -0.35
TOM1-218ENST00000608674 SUN1O94901 812 aa12.87□□□□□ -0.35
TOM1-218ENST00000608674 FTH1P02794 183 aa12.87□□□□□ -0.35
TOM1-218ENST00000608674 CCDC175P0C221 793 aa12.87□□□□□ -0.35
TOM1-218ENST00000608674 CDH3P22223 829 aa12.87□□□□□ -0.35
TOM1-218ENST00000608674 ADRA1DP25100 572 aa12.87□□□□□ -0.35
TOM1-218ENST00000608674 PDHA2P29803 388 aa12.87□□□□□ -0.35
TOM1-218ENST00000608674 PPARGP37231 505 aaPredicted RBP12.87□□□□□ -0.35
TOM1-218ENST00000608674 PREPP48147 710 aa12.87□□□□□ -0.35
TOM1-218ENST00000608674 KPNA2P52292 529 aaKnown RBP12.87□□□□□ -0.35
TOM1-218ENST00000608674 POLE2P56282 527 aa12.87□□□□□ -0.35
TOM1-218ENST00000608674 TUBB4BP68371 445 aa12.87□□□□□ -0.35
TOM1-218ENST00000608674 KCNAB2Q13303 367 aa12.87□□□□□ -0.35
TOM1-218ENST00000608674 TUBB2AQ13885 445 aa12.87□□□□□ -0.35
TOM1-218ENST00000608674 ITIH4Q14624 930 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms