RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 ARHGAP22Q7Z5H3 698 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 CLEC14AQ86T13 490 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 PDZD3Q86UT5 571 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 ZNF761Q86XN6 746 aaPredicted RBP13.94□□□□□ -0.18
HDDC2-206ENST00000608461 CILP2Q8IUL8 1156 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 CARFQ8N187 725 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 OTUD6BQ8N6M0 293 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 ACVR1CQ8NER5 493 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 ZNF669Q96BR6 464 aaPredicted RBP13.94□□□□□ -0.18
HDDC2-206ENST00000608461 PRR11Q96HE9 360 aaPredicted RBP13.94□□□□□ -0.18
HDDC2-206ENST00000608461 CCDC74BQ96LY2 380 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 RMDN2Q96LZ7 410 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 C16orf45Q96MC5 204 aaPredicted RBP13.94□□□□□ -0.18
HDDC2-206ENST00000608461 EBNA1BP2Q99848 306 aaKnown RBP13.94□□□□□ -0.18
HDDC2-206ENST00000608461 ERP44Q9BS26 406 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 ZMYND15Q9H091 742 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 ASCL3Q9NQ33 180 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 MARCH4Q9P2E8 410 aaPredicted RBP13.94□□□□□ -0.18
HDDC2-206ENST00000608461 POLG2Q9UHN1 485 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 SLC24A2Q9UI40 661 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 CDC23Q9UJX2 597 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 LOXL2Q9Y4K0 774 aa13.94□□□□□ -0.18
HDDC2-206ENST00000608461 MATN2O00339 956 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 NVLO15381 856 aaKnown RBP13.93□□□□□ -0.18
HDDC2-206ENST00000608461 GPC4O75487 556 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 APOA4P06727 396 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 ARL4CP56559 192 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 PLCL1Q15111 1095 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 TMED2Q15363 201 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 HIF1AQ16665 826 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 KCTD19Q17RG1 926 aaPredicted RBP13.93□□□□□ -0.18
HDDC2-206ENST00000608461 SYTL3Q4VX76 610 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 SPANXN3Q5MJ09 141 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 TMEM164Q5U3C3 297 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 PTRHD1Q6GMV3 140 aaKnown RBP13.93□□□□□ -0.18
HDDC2-206ENST00000608461 LILRA3Q8N6C8 439 aaPredicted RBP13.93□□□□□ -0.18
HDDC2-206ENST00000608461 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.93□□□□□ -0.18
HDDC2-206ENST00000608461 SPDYE1Q8NFV5 336 aaPredicted RBP13.93□□□□□ -0.18
HDDC2-206ENST00000608461 NAT14Q8WUY8 206 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 LPGAT1Q92604 370 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 TFGQ92734 400 aaPredicted RBP13.93□□□□□ -0.18
HDDC2-206ENST00000608461 FCRL3Q96P31 734 aaPredicted RBP13.93□□□□□ -0.18
HDDC2-206ENST00000608461 CD180Q99467 661 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 FAM167BQ9BTA0 163 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 TFB2MQ9H5Q4 396 aaKnown RBP13.93□□□□□ -0.18
HDDC2-206ENST00000608461 LATS2Q9NRM7 1088 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 OGFRQ9NZT2 677 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 WHRNQ9P202 907 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 FAM8A1Q9UBU6 413 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 ACSL6Q9UKU0 697 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 MRFAP1Q9Y605 127 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 COMMD10Q9Y6G5 202 aa13.93□□□□□ -0.18
HDDC2-206ENST00000608461 A0A087WV48 116 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 A0A1W2PNU3 283 aaPredicted RBP13.92□□□□□ -0.18
HDDC2-206ENST00000608461 B4E171 279 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 TAF4O00268 1085 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 CAPN5O15484 640 aaPredicted RBP13.92□□□□□ -0.18
HDDC2-206ENST00000608461 RRP8O43159 456 aaKnown RBP13.92□□□□□ -0.18
HDDC2-206ENST00000608461 SLCO2B1O94956 709 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 TNFSF15O95150 251 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 RPN2P04844 631 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 CD82P27701 267 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 AOAHP28039 575 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 ACADLP28330 430 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 PDHA2P29803 388 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 CCR7P32248 378 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 TSPAN7P41732 249 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 MAPK9P45984 424 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 ITGA8P53708 1063 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 PCBP4P57723 403 aaKnown RBP13.92□□□□□ -0.18
HDDC2-206ENST00000608461 RAB15P59190 212 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 DHX9Q08211 1270 aaKnown RBP13.92□□□□□ -0.18
HDDC2-206ENST00000608461 CALCOCO2Q13137 446 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 BOP1Q14137 746 aaKnown RBP13.92□□□□□ -0.18
HDDC2-206ENST00000608461 FRG1Q14331 258 aaKnown RBP13.92□□□□□ -0.18
HDDC2-206ENST00000608461 C16orf72Q14CZ0 275 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 WHAMMP3Q1A5X7 153 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 PLEKHS1Q5SXH7 462 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 CYB5D1Q6P9G0 228 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 PRSS42Q7Z5A4 293 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 LDB1Q86U70 411 aaPredicted RBP13.92□□□□□ -0.18
HDDC2-206ENST00000608461 OOSP2Q86WS3 158 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 TBC1D21Q8IYX1 336 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 SLC22A15Q8IZD6 547 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 AGGF1Q8N302 714 aaeCLIP13.92□□□□□ -0.18
HDDC2-206ENST00000608461 ZNF248Q8NDW4 579 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 C9orf72Q96LT7 481 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 BIRC8Q96P09 236 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 FERD3LQ96RJ6 166 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 TRIM51Q9BSJ1 452 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 RAB17Q9H0T7 212 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 C20orf96Q9NUD7 363 aaPredicted RBP13.92□□□□□ -0.18
HDDC2-206ENST00000608461 SEMA5BQ9P283 1151 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 KLHL42Q9P2K6 505 aa13.92□□□□□ -0.18
HDDC2-206ENST00000608461 UTP11Q9Y3A2 253 aaKnown RBP13.92□□□□□ -0.18
HDDC2-206ENST00000608461 CFAP20Q9Y6A4 193 aaKnown RBP13.92□□□□□ -0.18
HDDC2-206ENST00000608461 UBA6A0AVT1 1052 aaPredicted RBP13.91□□□□□ -0.18
HDDC2-206ENST00000608461 OR5K3A6NET4 321 aa13.91□□□□□ -0.18
HDDC2-206ENST00000608461 SRRM3A6NNA2 597 aaPredicted RBP13.91□□□□□ -0.18
HDDC2-206ENST00000608461 BHMG1C9JSJ3 638 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms