RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 VOPP1Q96AW1 172 aa11.59□□□□□ -0.55
HMGN3-AS1-201ENST00000604516 FBXL20Q96IG2 436 aa11.59□□□□□ -0.55
HMGN3-AS1-201ENST00000604516 RNF208Q9H0X6 261 aa11.59□□□□□ -0.55
HMGN3-AS1-201ENST00000604516 RBM38Q9H0Z9 239 aaKnown RBP11.59□□□□□ -0.55
HMGN3-AS1-201ENST00000604516 H3BNH8 94 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 DFNA5O60443 496 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 RGS4P49798 205 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 EMX2Q04743 252 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 PLEKHG6Q3KR16 790 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 LRRC66Q68CR7 880 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 GLYATQ6IB77 296 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 TBPL2Q6SJ96 375 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CRTC1Q6UUV9 634 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 PTRH1Q86Y79 214 aaKnown RBP11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 DTWD1Q8N5C7 304 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 PDPRQ8NCN5 879 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 RHBDF1Q96CC6 855 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ANKRD60Q9BZ19 345 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 PFDN4Q9NQP4 134 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 HEBP1Q9NRV9 189 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ABCB8Q9NUT2 735 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 VAPAQ9P0L0 249 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CD84Q9UIB8 345 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 MYRFQ9Y2G1 1151 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SH3BP1Q9Y3L3 701 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CCL27Q9Y4X3 112 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 MAGED1Q9Y5V3 778 aaPredicted RBP11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 DGKAP23743 735 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 NR1H2P55055 460 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CPSF6Q16630 551 aaKnown RBP eCLIP11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ATP13A5Q4VNC0 1218 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 OTUD3Q5T2D3 398 aaPredicted RBP11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ZNF786Q8N393 782 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 MAGEE2Q8TD90 523 aaPredicted RBP11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SKA2Q8WVK7 121 aaPredicted RBP11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ISG20Q96AZ6 181 aaKnown RBP11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ASIC4Q96FT7 647 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 RMND5BQ96G75 393 aaPredicted RBP11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 VPS50Q96JG6 964 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ADI1Q9BV57 179 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CHID1Q9BWS9 393 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 LRRC3Q9BY71 257 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 EPB41L1Q9H4G0 881 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ATP13A3Q9H7F0 1226 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 HSFX1Q9UBD0 423 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 OPTCQ9UBM4 332 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SLCO3A1Q9UIG8 710 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ANAPC2Q9UJX6 822 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CCL26Q9Y258 94 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 OARD1Q9Y530 152 aa11.58□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 MTX2O75431 263 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 OLFM2O95897 454 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 HLA-FP30511 346 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 RFC2P35250 354 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 PPP3CCP48454 512 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ZXDCQ2QGD7 858 aaPredicted RBP11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 FAM174BQ3ZCQ3 159 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SLC22A15Q8IZD6 547 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 NXPE1Q8N323 547 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ACDQ96AP0 544 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CGREF1Q99674 301 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CD244Q9BZW8 370 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 IKZF5Q9H5V7 419 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 LIN28AQ9H9Z2 209 aaKnown RBP11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 PNPLA3Q9NST1 481 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 TGM5O43548 720 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 B3GALT4O96024 378 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 GLUD1P00367 558 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 GPIP06744 558 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ENO2P09104 434 aaPredicted RBP11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 LHCGRP22888 699 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 EEFSECP57772 596 aaKnown RBP11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 NAA20P61599 178 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 B4GALNT1Q00973 533 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 HSPA14Q0VDF9 509 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 MERTKQ12866 999 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 TMEM214Q6NUQ4 689 aaKnown RBP11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SLC39A5Q6ZMH5 540 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 FAM86B1Q8N7N1 296 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 OR2AP1Q8NGE2 309 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 MRPS31Q92665 395 aaKnown RBP11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 PYCR2Q96C36 320 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SH3GL3Q99963 347 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 TBCDQ9BTW9 1192 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 NDUFA13Q9P0J0 144 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 FAM8A1Q9UBU6 413 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 LSM7Q9UK45 103 aaKnown RBP11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ZNF490Q9ULM2 529 aaPredicted RBP11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 NEUROG3Q9Y4Z2 214 aa11.57□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 TRBV5-4A0A0C4DH59 114 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 FKTNO75072 461 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ULK1O75385 1050 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SEC22BO75396 215 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SNAP29O95721 258 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SRCP12931 536 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ZNF23P17027 643 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 RPS3P23396 243 aaKnown RBP eCLIP11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 NFKBIAP25963 317 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 VARSP26640 1264 aaKnown RBP11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SPAM1P38567 509 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms