RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 OR52A5Q9H2C5 316 aa15.96■□□□□ 0.15
TUBE1-206ENST00000603722 PDE7BQ9NP56 450 aa15.96■□□□□ 0.15
TUBE1-206ENST00000603722 LZTFL1Q9NQ48 299 aa15.96■□□□□ 0.15
TUBE1-206ENST00000603722 SMARCAL1Q9NZC9 954 aa15.96■□□□□ 0.15
TUBE1-206ENST00000603722 AHCTF1Q8WYP5 2266 aa15.96■□□□□ 0.14
TUBE1-206ENST00000603722 ERI2A8K979 691 aaKnown RBP15.95■□□□□ 0.14
TUBE1-206ENST00000603722 IFRD1O00458 451 aaPredicted RBP15.95■□□□□ 0.14
TUBE1-206ENST00000603722 TIAF1O95411 115 aa15.95■□□□□ 0.14
TUBE1-206ENST00000603722 GAS8O95995 478 aa15.95■□□□□ 0.14
TUBE1-206ENST00000603722 POLR2CP19387 275 aaPredicted RBP15.95■□□□□ 0.14
TUBE1-206ENST00000603722 FDFT1P37268 417 aa15.95■□□□□ 0.14
TUBE1-206ENST00000603722 GRIA1P42261 906 aa15.95■□□□□ 0.14
TUBE1-206ENST00000603722 PREPP48147 710 aa15.95■□□□□ 0.14
TUBE1-206ENST00000603722 CDC20Q12834 499 aa15.95■□□□□ 0.14
TUBE1-206ENST00000603722 SKIDA1Q1XH10 827 aa15.95■□□□□ 0.14
TUBE1-206ENST00000603722 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.95■□□□□ 0.14
TUBE1-206ENST00000603722 ZNF658BQ4V348 819 aaPredicted RBP15.95■□□□□ 0.14
TUBE1-206ENST00000603722 FBXO38Q6PIJ6 1188 aa15.95■□□□□ 0.14
TUBE1-206ENST00000603722 CCDC89Q8N998 374 aa15.95■□□□□ 0.14
TUBE1-206ENST00000603722 ACVR1CQ8NER5 493 aa15.95■□□□□ 0.14
TUBE1-206ENST00000603722 OR4E2Q8NGC2 313 aa15.95■□□□□ 0.14
TUBE1-206ENST00000603722 FERD3LQ96RJ6 166 aa15.95■□□□□ 0.14
TUBE1-206ENST00000603722 RAB6BQ9NRW1 208 aa15.95■□□□□ 0.14
TUBE1-206ENST00000603722 CROTQ9UKG9 612 aa15.95■□□□□ 0.14
TUBE1-206ENST00000603722 MRPS18BQ9Y676 258 aaKnown RBP15.95■□□□□ 0.14
TUBE1-206ENST00000603722 FASNP49327 2511 aaKnown RBP15.95■□□□□ 0.14
TUBE1-206ENST00000603722 SDK2Q58EX2 2172 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 HEATR9A2RTY3 570 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 CCDC162PA2VCL2 907 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 SUN1O94901 812 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 AP2A2O94973 939 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 CCDC175P0C221 793 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 ZSCAN5DPP0CG00 497 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 ITGB6P18564 788 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 F8A1P23610 371 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 PSMA3P25788 255 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 PDHA2P29803 388 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 FOXN2P32314 431 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 DLSTP36957 453 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 NSG1P42857 185 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 KPNA2P52292 529 aaKnown RBP15.94■□□□□ 0.14
TUBE1-206ENST00000603722 POLE2P56282 527 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 ACY1Q03154 408 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 PRKAA1Q13131 559 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 SEMA5AQ13591 1074 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 ITIH4Q14624 930 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 ATP1A1-AS1Q5TC04 95 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 C16orf46Q6P387 395 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 PRICKLE2Q7Z3G6 844 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 KMT5CQ86Y97 462 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 GLIS1Q8NBF1 620 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 OR13J1Q8NGT2 312 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 PPM1MQ96MI6 270 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 CATSPER2Q96P56 530 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 SLC2A6Q9UGQ3 507 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 RARRES3Q9UL19 164 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 PRSS21Q9Y6M0 314 aa15.94■□□□□ 0.14
TUBE1-206ENST00000603722 ZFC3H1O60293 1989 aaKnown RBP15.93■□□□□ 0.14
TUBE1-206ENST00000603722 ZNF106Q9H2Y7 1883 aaKnown RBP15.93■□□□□ 0.14
TUBE1-206ENST00000603722 GSAPA4D1B5 854 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 GOLGA6L3A6NEY3 463 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 J3QKU1 62 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 SLC28A2O43868 658 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 ZBTB11O95625 1053 aaPredicted RBP15.93■□□□□ 0.14
TUBE1-206ENST00000603722 APRTP07741 180 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 SFTPCP11686 197 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 OAS2P29728 719 aaKnown RBP15.93■□□□□ 0.14
TUBE1-206ENST00000603722 HSD11B2P80365 405 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 NFKB2Q00653 900 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 RPA4Q13156 261 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 SIX1Q15475 284 aaPredicted RBP15.93■□□□□ 0.14
TUBE1-206ENST00000603722 PWWP2BQ6NUJ5 590 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 ZNF449Q6P9G9 518 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 AFTPHQ6ULP2 937 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 PIAS4Q8N2W9 510 aaPredicted RBP15.93■□□□□ 0.14
TUBE1-206ENST00000603722 D2HGDHQ8N465 521 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 UBE2Q2Q8WVN8 375 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 LCN9Q8WX39 176 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 HDAC10Q969S8 669 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.93■□□□□ 0.14
TUBE1-206ENST00000603722 NRTNQ99748 197 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 HGH1Q9BTY7 390 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 FAM117AQ9C073 453 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 SRMSQ9H3Y6 488 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 FGF21Q9NSA1 209 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 STARD5Q9NSY2 213 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 GEMIN8Q9NWZ8 242 aaKnown RBP15.93■□□□□ 0.14
TUBE1-206ENST00000603722 SOHLH2Q9NX45 425 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 PAK5Q9P286 719 aa15.93■□□□□ 0.14
TUBE1-206ENST00000603722 HEMK1Q9Y5R4 338 aaPredicted RBP15.93■□□□□ 0.14
TUBE1-206ENST00000603722 ZNF462Q96JM2 2506 aa15.92■□□□□ 0.14
TUBE1-206ENST00000603722 PYCARD-AS1I3L0S3 204 aa15.92■□□□□ 0.14
TUBE1-206ENST00000603722 ZIC2O95409 532 aaPredicted RBP15.92■□□□□ 0.14
TUBE1-206ENST00000603722 GOT2P00505 430 aaKnown RBP15.92■□□□□ 0.14
TUBE1-206ENST00000603722 GSTM1P09488 218 aa15.92■□□□□ 0.14
TUBE1-206ENST00000603722 TCN2P20062 427 aa15.92■□□□□ 0.14
TUBE1-206ENST00000603722 CCR10P46092 362 aa15.92■□□□□ 0.14
TUBE1-206ENST00000603722 CD151P48509 253 aa15.92■□□□□ 0.14
TUBE1-206ENST00000603722 MC1RQ01726 317 aa15.92■□□□□ 0.14
TUBE1-206ENST00000603722 GSTM4Q03013 218 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms