RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 ERAP2Q6P179 960 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 EMBQ6PCB8 327 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 CCNI2Q6ZMN8 369 aaPredicted RBP10.31□□□□□ -0.76
SMG9-207ENST00000598860 ERN2Q76MJ5 926 aaKnown RBP10.31□□□□□ -0.76
SMG9-207ENST00000598860 PARS2Q7L3T8 475 aaKnown RBP10.31□□□□□ -0.76
SMG9-207ENST00000598860 NLRP9Q7RTR0 991 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 DEFB119Q8N690 84 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 PPHLN1Q8NEY8 458 aaKnown RBP10.31□□□□□ -0.76
SMG9-207ENST00000598860 PIGKQ92643 395 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 PEX13Q92968 403 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 VOPP1Q96AW1 172 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 SIPA1Q96FS4 1042 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 SCRN2Q96FV2 425 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 NSMCE3Q96MG7 304 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 MCCC1Q96RQ3 725 aaPredicted RBP10.31□□□□□ -0.76
SMG9-207ENST00000598860 APOL2Q9BQE5 337 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 PARD6BQ9BYG5 372 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 SLC13A1Q9BZW2 595 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 MRM3Q9HC36 420 aaKnown RBP10.31□□□□□ -0.76
SMG9-207ENST00000598860 MAGEE1Q9HCI5 957 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 ITM2CQ9NQX7 267 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 DLL3Q9NYJ7 618 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 RIMKLBQ9ULI2 386 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 FZD4Q9ULV1 537 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 NFU1Q9UMS0 254 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 NCKAP1Q9Y2A7 1128 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 PI4KAP42356 2102 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 PLXNB3Q9ULL4 1909 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 CFAP54Q96N23 3096 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 MAGEB16A2A368 324 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 CCDC151A5D8V7 595 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 SDR42E2A6NKP2 422 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 FAM90A27PA6NNH2 459 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 C16orf96A6NNT2 1141 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 GOLGA8MH3BSY2 632 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 PSMD11O00231 422 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 MID1O15344 667 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 AP1G1O43747 822 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 USP12O75317 370 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 PDHA1P08559 390 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 ACADMP11310 421 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 ADRB3P13945 408 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 ADRA1DP25100 572 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 OXTRP30559 389 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 DPP6P42658 865 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 PTGER3P43115 390 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 VSNL1P62760 191 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 PDIA2Q13087 525 aaKnown RBP10.3□□□□□ -0.76
SMG9-207ENST00000598860 ARHGEF7Q14155 803 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 BRD3Q15059 726 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 TAF1AQ15573 450 aaPredicted RBP10.3□□□□□ -0.76
SMG9-207ENST00000598860 TRADDQ15628 312 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 CCDC38Q502W7 563 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 PCID2Q5JVF3 399 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 FAM182AQ5T1J6 154 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 LYSMD4Q5XG99 296 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 DPPA4Q7L190 304 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 KDELC2Q7Z4H8 507 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 CAND1Q86VP6 1230 aaKnown RBP10.3□□□□□ -0.76
SMG9-207ENST00000598860 SYT12Q8IV01 421 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 CMIPQ8IY22 773 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 SLC25A41Q8N5S1 370 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 C1orf162Q8NEQ5 155 aaPredicted RBP10.3□□□□□ -0.76
SMG9-207ENST00000598860 BRSK1Q8TDC3 778 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 FAM131CQ96AQ9 280 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 ARRDC3Q96B67 414 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 TTC25Q96NG3 672 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 OMDQ99983 421 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 ZDHHC5Q9C0B5 715 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 TNFRSF12AQ9NP84 129 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 RIC8BQ9NVN3 520 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 ARGLU1Q9NWB6 273 aaPredicted RBP10.3□□□□□ -0.76
SMG9-207ENST00000598860 GEMIN8Q9NWZ8 242 aaKnown RBP10.3□□□□□ -0.76
SMG9-207ENST00000598860 ZNF180Q9UJW8 692 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 ZNF711Q9Y462 761 aa10.3□□□□□ -0.76
SMG9-207ENST00000598860 TP53BP1Q12888 1972 aaPredicted RBP10.29□□□□□ -0.76
SMG9-207ENST00000598860 C2orf81A6NN90 581 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 SPAG6O75602 509 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 TTC4O95801 387 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 IGLV3-19P01714 112 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 DBHP09172 617 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 GSTA2P09210 222 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 TSHRP16473 764 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 PGAM1P18669 254 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 CD40P25942 277 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 MGAT1P26572 445 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 CD6P30203 668 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 VIPR1P32241 457 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 DRD3P35462 400 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 GRIA1P42261 906 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 TPMTP51580 245 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 SESN2P58004 480 aaPredicted RBP10.29□□□□□ -0.76
SMG9-207ENST00000598860 KCTD19Q17RG1 926 aaPredicted RBP10.29□□□□□ -0.76
SMG9-207ENST00000598860 ZDHHC20Q5W0Z9 365 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 OGFOD2Q6N063 350 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 DGLUCYQ7Z3D6 616 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 GLT6D1Q7Z4J2 308 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 TTC7BQ86TV6 843 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 CCDC25Q86WR0 208 aa10.29□□□□□ -0.76
SMG9-207ENST00000598860 ZZZ3Q8IYH5 903 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms