RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 OR52A5Q9H2C5 316 aa21.64■■□□□ 1.05
CHMP2A-204ENST00000597848 LATS2Q9NRM7 1088 aa21.64■■□□□ 1.05
CHMP2A-204ENST00000597848 IMP3Q9NV31 184 aaKnown RBP21.64■■□□□ 1.05
CHMP2A-204ENST00000597848 MED16Q9Y2X0 877 aa21.64■■□□□ 1.05
CHMP2A-204ENST00000597848 MTO1Q9Y2Z2 717 aaKnown RBP21.64■■□□□ 1.05
CHMP2A-204ENST00000597848 DHRS7Q9Y394 339 aa21.64■■□□□ 1.05
CHMP2A-204ENST00000597848 CFAP20Q9Y6A4 193 aaKnown RBP21.64■■□□□ 1.05
CHMP2A-204ENST00000597848 TM4SF5O14894 197 aa21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 TNFSF14O43557 240 aa21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 VIPP01282 170 aa21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 INHBAP08476 426 aa21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 CKMT1AP12532 417 aa21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 CKMT2P17540 419 aa21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 CSRP1P21291 193 aaKnown RBP21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 SKIV2L2P42285 1042 aaKnown RBP21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 SLC12A2P55011 1212 aa21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 DNAJC3Q13217 504 aa21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 KRT33BQ14525 404 aa21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 RPE65Q16518 533 aa21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 CAPRIN2Q6IMN6 1127 aaKnown RBP21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 VRK3Q8IV63 474 aa21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 ACVR1CQ8NER5 493 aa21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 BAHD1Q8TBE0 780 aaPredicted RBP21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 CAVIN3Q969G5 261 aa21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 SLC30A3Q99726 388 aa21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 MCMBPQ9BTE3 642 aa21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 EPB41L4BQ9H329 900 aa21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 STN1Q9H668 368 aaKnown RBP21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 ZNF624Q9P2J8 865 aaPredicted RBP21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 CPNE7Q9UBL6 633 aa21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 TSR3Q9UJK0 312 aaKnown RBP21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 SLC39A10Q9ULF5 831 aa21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 PIKFYVEQ9Y2I7 2098 aa21.63■■□□□ 1.05
CHMP2A-204ENST00000597848 LAMA1P25391 3075 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 LY6G6EA0A0G2JKS1 128 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 RHPN2P1A8MT19 583 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 SLCO2B1O94956 709 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 XRCC1P18887 633 aaPredicted RBP21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 FDXRP22570 491 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 HSD17B3P37058 310 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 SLC19A1P41440 591 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 LIMK2P53671 638 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 ABRQ12979 859 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 PDAP1Q13442 181 aaKnown RBP21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 PDZD3Q86UT5 571 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 PIM3Q86V86 326 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 C17orf82Q86X59 251 aaPredicted RBP21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 SLC22A15Q8IZD6 547 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 AVL9Q8NBF6 648 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 CD200R1Q8TD46 325 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 PAFAH2Q99487 392 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 OLFM1Q99784 485 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 RTKNQ9BST9 563 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 KLHL42Q9P2K6 505 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 LRIT1Q9P2V4 623 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 CDYLQ9Y232 598 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 U3KQA8 63 aa21.62■■□□□ 1.05
CHMP2A-204ENST00000597848 ARID1BQ8NFD5 2236 aaPredicted RBP21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 MTHFD1P11586 935 aaKnown RBP21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 NOVA1P51513 510 aaKnown RBP21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 TIAL1Q01085 375 aaKnown RBP eCLIP21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 POU4F1Q01851 419 aa21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 HHEXQ03014 270 aa21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 USP10Q14694 798 aaKnown RBP21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 CCDC157Q569K6 752 aa21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 ACSBG2Q5FVE4 666 aa21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 GUSBP11Q6P575 273 aa21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 EFL1Q7Z2Z2 1120 aaKnown RBP21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 SPNS2Q8IVW8 549 aa21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 OR6C4Q8NGE1 309 aa21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 CFAP61Q8NHU2 1237 aa21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 GIMAP7Q8NHV1 300 aa21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 SLC44A1Q8WWI5 657 aa21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 TFGQ92734 400 aaPredicted RBP21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 TSPAN17Q96FV3 270 aa21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 FERD3LQ96RJ6 166 aa21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 GPR22Q99680 433 aa21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 RNF215Q9Y6U7 377 aa21.61■■□□□ 1.05
CHMP2A-204ENST00000597848 PIEZO1Q92508 2521 aa21.6■■□□□ 1.05
CHMP2A-204ENST00000597848 EME2A4GXA9 379 aaPredicted RBP21.6■■□□□ 1.05
CHMP2A-204ENST00000597848 ERLIN1O75477 346 aa21.6■■□□□ 1.05
CHMP2A-204ENST00000597848 ITGA2BP08514 1039 aa21.6■■□□□ 1.05
CHMP2A-204ENST00000597848 GLB1P16278 677 aa21.6■■□□□ 1.05
CHMP2A-204ENST00000597848 CD9P21926 228 aa21.6■■□□□ 1.05
CHMP2A-204ENST00000597848 PGGT1BP53609 377 aa21.6■■□□□ 1.05
CHMP2A-204ENST00000597848 TAS2R39P59534 338 aa21.6■■□□□ 1.05
CHMP2A-204ENST00000597848 DUS1LQ6P1R4 473 aaKnown RBP21.6■■□□□ 1.05
CHMP2A-204ENST00000597848 PAQR3Q6TCH7 311 aa21.6■■□□□ 1.05
CHMP2A-204ENST00000597848 TAOK1Q7L7X3 1001 aa21.6■■□□□ 1.05
CHMP2A-204ENST00000597848 CPNE9Q8IYJ1 553 aa21.6■■□□□ 1.05
CHMP2A-204ENST00000597848 PHC3Q8NDX5 983 aa21.6■■□□□ 1.05
CHMP2A-204ENST00000597848 NAT6Q93015 286 aa21.6■■□□□ 1.05
CHMP2A-204ENST00000597848 SH3KBP1Q96B97 665 aa21.6■■□□□ 1.05
CHMP2A-204ENST00000597848 CAB39LQ9H9S4 337 aa21.6■■□□□ 1.05
CHMP2A-204ENST00000597848 HEBP2Q9Y5Z4 205 aa21.6■■□□□ 1.05
CHMP2A-204ENST00000597848 COLEC10Q9Y6Z7 277 aa21.6■■□□□ 1.05
CHMP2A-204ENST00000597848 ARHGEF17Q96PE2 2063 aaPredicted RBP21.6■■□□□ 1.05
CHMP2A-204ENST00000597848 ZFC3H1O60293 1989 aaKnown RBP21.59■■□□□ 1.05
CHMP2A-204ENST00000597848 PRAMEF33A0A0G2JMD5 474 aa21.59■■□□□ 1.05
CHMP2A-204ENST00000597848 SPAARA0A1B0GVQ0 90 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms