RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 ZCCHC2Q9C0B9 1178 aaKnown RBP14.71□□□□□ -0.05
TRIM28-207ENST00000597136 ACBD3Q9H3P7 528 aa14.71□□□□□ -0.05
TRIM28-207ENST00000597136 OSGEPL1Q9H4B0 414 aa14.71□□□□□ -0.05
TRIM28-207ENST00000597136 PRDM8Q9NQV8 689 aa14.71□□□□□ -0.05
TRIM28-207ENST00000597136 FAM8A1Q9UBU6 413 aa14.71□□□□□ -0.05
TRIM28-207ENST00000597136 GOLGA6L10A6NI86 522 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 TRIM49D1C9J1S8 452 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 CFAP99D6REC4 459 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 RGS16O15492 202 aaPredicted RBP14.7□□□□□ -0.06
TRIM28-207ENST00000597136 ESR1P03372 595 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 FTH1P19P0C7X4 201 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 RALBP11234 206 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 RPL10P27635 214 aaKnown RBP14.7□□□□□ -0.06
TRIM28-207ENST00000597136 MAZP56270 477 aaKnown RBP14.7□□□□□ -0.06
TRIM28-207ENST00000597136 NFE2L1Q14494 772 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 CTSL3PQ5NE16 218 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 PERM1Q5SV97 790 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 RBM20Q5T481 1227 aaKnown RBP14.7□□□□□ -0.06
TRIM28-207ENST00000597136 CNPY4Q8N129 248 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 GPATCH11Q8N954 259 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 MZB1Q8WU39 189 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 MTBPQ96DY7 904 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 PGM2Q96G03 612 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 NDNQ99608 321 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 SH3GL2Q99962 352 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 TIMM29Q9BSF4 260 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 AARSD1Q9BTE6 412 aaKnown RBP14.7□□□□□ -0.06
TRIM28-207ENST00000597136 CENPHQ9H3R5 247 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 TMBIM4Q9HC24 238 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 SCHIP1Q9P0W5 487 aaPredicted RBP14.7□□□□□ -0.06
TRIM28-207ENST00000597136 PADI4Q9UM07 663 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 PCDHB1Q9Y5F3 818 aa14.7□□□□□ -0.06
TRIM28-207ENST00000597136 FAM95CA0A1B0GW59 222 aa14.69□□□□□ -0.06
TRIM28-207ENST00000597136 A6NCN8 305 aa14.69□□□□□ -0.06
TRIM28-207ENST00000597136 OPA1O60313 960 aa14.69□□□□□ -0.06
TRIM28-207ENST00000597136 PKMP14618 531 aaKnown RBP14.69□□□□□ -0.06
TRIM28-207ENST00000597136 ACP1P24666 158 aa14.69□□□□□ -0.06
TRIM28-207ENST00000597136 ACADVLP49748 655 aa14.69□□□□□ -0.06
TRIM28-207ENST00000597136 CLDN6P56747 220 aa14.69□□□□□ -0.06
TRIM28-207ENST00000597136 SEPT7Q16181 437 aaKnown RBP14.69□□□□□ -0.06
TRIM28-207ENST00000597136 HECTD2Q5U5R9 776 aa14.69□□□□□ -0.06
TRIM28-207ENST00000597136 NAPRTQ6XQN6 538 aa14.69□□□□□ -0.06
TRIM28-207ENST00000597136 AMZ2Q86W34 360 aa14.69□□□□□ -0.06
TRIM28-207ENST00000597136 C17orf82Q86X59 251 aaPredicted RBP14.69□□□□□ -0.06
TRIM28-207ENST00000597136 ELMO2Q96JJ3 720 aa14.69□□□□□ -0.06
TRIM28-207ENST00000597136 CCDC68Q9H2F9 335 aa14.69□□□□□ -0.06
TRIM28-207ENST00000597136 GNPTGQ9UJJ9 305 aa14.69□□□□□ -0.06
TRIM28-207ENST00000597136 SLC39A10Q9ULF5 831 aa14.69□□□□□ -0.06
TRIM28-207ENST00000597136 VWA7Q9Y334 891 aa14.69□□□□□ -0.06
TRIM28-207ENST00000597136 COMMD10Q9Y6G5 202 aa14.69□□□□□ -0.06
TRIM28-207ENST00000597136 CHD8Q9HCK8 2581 aa14.69□□□□□ -0.06
TRIM28-207ENST00000597136 SPTBP11277 2137 aa14.69□□□□□ -0.06
TRIM28-207ENST00000597136 EME2A4GXA9 379 aaPredicted RBP14.68□□□□□ -0.06
TRIM28-207ENST00000597136 FOXO6A8MYZ6 492 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 AP2A2O94973 939 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 TOP3BO95985 862 aaKnown RBP14.68□□□□□ -0.06
TRIM28-207ENST00000597136 ALDOAP04075 364 aaKnown RBP14.68□□□□□ -0.06
TRIM28-207ENST00000597136 BRAFP15056 766 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 PRLHRP49683 370 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 CLCNKAP51800 687 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 CDKN2DP55273 166 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 TIAL1Q01085 375 aaKnown RBP eCLIP14.68□□□□□ -0.06
TRIM28-207ENST00000597136 POU4F1Q01851 419 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 NR0B2Q15466 257 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 BCL7AQ4VC05 210 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 TNFAIP8L3Q5GJ75 292 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 PTRHD1Q6GMV3 140 aaKnown RBP14.68□□□□□ -0.06
TRIM28-207ENST00000597136 TIFABQ6ZNK6 161 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 SPNS2Q8IVW8 549 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 ARL14Q8N4G2 192 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 ARL10Q8N8L6 244 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 ZNF514Q96K75 400 aaPredicted RBP14.68□□□□□ -0.06
TRIM28-207ENST00000597136 CAB39LQ9H9S4 337 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 PSMD13Q9UNM6 376 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 WDR37Q9Y2I8 494 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 MED16Q9Y2X0 877 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 DNMT3AQ9Y6K1 912 aaPredicted RBP14.68□□□□□ -0.06
TRIM28-207ENST00000597136 PRAMEF33A0A0G2JMD5 474 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 MGAT4DA6NG13 374 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 IQCF5A8MTL0 148 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 H3BMM5 538 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 PPM1DO15297 605 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 KRT15P19012 456 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 SAT1P21673 171 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 TAS2R39P59534 338 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 USP10Q14694 798 aaKnown RBP14.68□□□□□ -0.06
TRIM28-207ENST00000597136 ZNF658BQ4V348 819 aaPredicted RBP14.68□□□□□ -0.06
TRIM28-207ENST00000597136 C14orf28Q4W4Y0 310 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 METRNLQ641Q3 311 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 FAM45BPQ6NSW5 357 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 IYDQ6PHW0 289 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 EFL1Q7Z2Z2 1120 aaKnown RBP14.68□□□□□ -0.06
TRIM28-207ENST00000597136 CFAP206Q8IYR0 622 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 OR2L2Q8NH16 312 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 IFI44Q8TCB0 444 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 FAM45AQ8TCE6 357 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 LKAAEAR1Q8TD35 194 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 SLC37A2Q8TED4 501 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 KCNJ9Q92806 393 aa14.68□□□□□ -0.06
TRIM28-207ENST00000597136 GLMNQ92990 594 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms